Protein–RNA interactions for Protein: Q01118

SCN7A, Sodium channel protein type 7 subunit alpha, humanhuman

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7AQ01118 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SCN7AQ01118 CAMP-201ENST00000296435 745 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SCN7AQ01118 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SCN7AQ01118 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
SCN7AQ01118 RHOC-205ENST00000369636 786 ntTSL 2 BASIC17.64■□□□□ 0.42
SCN7AQ01118 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
SCN7AQ01118 OR10N1P-201ENST00000392758 869 ntBASIC17.64■□□□□ 0.42
SCN7AQ01118 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SCN7AQ01118 FAM21EP-201ENST00000417804 985 ntBASIC17.64■□□□□ 0.42
SCN7AQ01118 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC17.64■□□□□ 0.42
SCN7AQ01118 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC17.64■□□□□ 0.42
SCN7AQ01118 CD81-209ENST00000492627 886 ntTSL 3 BASIC17.64■□□□□ 0.42
SCN7AQ01118 COQ10BP2-201ENST00000513804 724 ntBASIC17.64■□□□□ 0.42
SCN7AQ01118 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC17.64■□□□□ 0.42
SCN7AQ01118 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC17.64■□□□□ 0.42
SCN7AQ01118 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC17.64■□□□□ 0.42
SCN7AQ01118 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC17.64■□□□□ 0.42
SCN7AQ01118 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC17.64■□□□□ 0.42
SCN7AQ01118 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC17.64■□□□□ 0.42
SCN7AQ01118 GGNBP1-204ENST00000613113 887 ntBASIC17.64■□□□□ 0.42
SCN7AQ01118 AL627230.2-201ENST00000613254 655 ntBASIC17.64■□□□□ 0.42
SCN7AQ01118 AC005274.1-201ENST00000623460 802 ntBASIC17.64■□□□□ 0.42
SCN7AQ01118 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC17.64■□□□□ 0.42
SCN7AQ01118 PES1P2-201ENST00000449745 1735 ntBASIC17.64■□□□□ 0.42
SCN7AQ01118 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.42
SCN7AQ01118 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
SCN7AQ01118 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC17.64■□□□□ 0.41
SCN7AQ01118 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
SCN7AQ01118 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SCN7AQ01118 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SCN7AQ01118 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SCN7AQ01118 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC17.64■□□□□ 0.41
SCN7AQ01118 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
SCN7AQ01118 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC17.64■□□□□ 0.41
SCN7AQ01118 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SCN7AQ01118 MYB-242ENST00000618728 3545 ntTSL 5 BASIC17.64■□□□□ 0.41
SCN7AQ01118 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SCN7AQ01118 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SCN7AQ01118 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SCN7AQ01118 U3.5-201ENST00000363448 216 ntBASIC17.64■□□□□ 0.41
SCN7AQ01118 NRADDP-201ENST00000437305 691 ntBASIC17.64■□□□□ 0.41
SCN7AQ01118 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
SCN7AQ01118 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC17.64■□□□□ 0.41
SCN7AQ01118 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC17.64■□□□□ 0.41
SCN7AQ01118 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SCN7AQ01118 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SCN7AQ01118 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC17.64■□□□□ 0.41
SCN7AQ01118 ZNF691-201ENST00000372502 1910 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
SCN7AQ01118 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SCN7AQ01118 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SCN7AQ01118 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SCN7AQ01118 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SCN7AQ01118 CICP14-201ENST00000629111 2732 ntBASIC17.63■□□□□ 0.41
SCN7AQ01118 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
SCN7AQ01118 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
SCN7AQ01118 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SCN7AQ01118 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
SCN7AQ01118 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
SCN7AQ01118 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
SCN7AQ01118 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
SCN7AQ01118 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SCN7AQ01118 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC17.63■□□□□ 0.41
SCN7AQ01118 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SCN7AQ01118 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC17.63■□□□□ 0.41
SCN7AQ01118 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
SCN7AQ01118 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SCN7AQ01118 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
SCN7AQ01118 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC17.63■□□□□ 0.41
SCN7AQ01118 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC17.63■□□□□ 0.41
SCN7AQ01118 CD44-224ENST00000526669 870 ntTSL 5 BASIC17.63■□□□□ 0.41
SCN7AQ01118 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
SCN7AQ01118 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC17.63■□□□□ 0.41
SCN7AQ01118 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SCN7AQ01118 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SCN7AQ01118 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
SCN7AQ01118 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SCN7AQ01118 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC17.63■□□□□ 0.41
SCN7AQ01118 MBP-202ENST00000355994 2772 ntTSL 5 BASIC17.63■□□□□ 0.41
SCN7AQ01118 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SCN7AQ01118 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SCN7AQ01118 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
SCN7AQ01118 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
SCN7AQ01118 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SCN7AQ01118 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC17.62■□□□□ 0.41
SCN7AQ01118 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SCN7AQ01118 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SCN7AQ01118 AF274858.1-201ENST00000406288 372 ntBASIC17.62■□□□□ 0.41
SCN7AQ01118 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SCN7AQ01118 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC17.62■□□□□ 0.41
SCN7AQ01118 RN7SL128P-201ENST00000467883 305 ntBASIC17.62■□□□□ 0.41
SCN7AQ01118 SEPHS2P1-201ENST00000511618 1162 ntBASIC17.62■□□□□ 0.41
SCN7AQ01118 MIR5001-201ENST00000580185 100 ntBASIC17.62■□□□□ 0.41
SCN7AQ01118 MBP-238ENST00000580402 915 ntTSL 5 BASIC17.62■□□□□ 0.41
SCN7AQ01118 KRT17P4-206ENST00000584151 719 ntTSL 4 BASIC17.62■□□□□ 0.41
SCN7AQ01118 AC018695.6-201ENST00000614011 534 ntBASIC17.62■□□□□ 0.41
SCN7AQ01118 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC17.62■□□□□ 0.41
SCN7AQ01118 PNPT1-207ENST00000625249 216 ntTSL 5 BASIC17.62■□□□□ 0.41
SCN7AQ01118 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
SCN7AQ01118 RPL13AP3-202ENST00000494676 1473 ntBASIC17.62■□□□□ 0.41
SCN7AQ01118 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 148.2 ms