Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CNTNAP1P78357 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CNTNAP1P78357 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CNTNAP1P78357 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CNTNAP1P78357 COLQ-202ENST00000383786 1482 ntTSL 5 BASIC17.08■□□□□ 0.32
CNTNAP1P78357 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CNTNAP1P78357 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC17.08■□□□□ 0.32
CNTNAP1P78357 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC17.08■□□□□ 0.32
CNTNAP1P78357 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC17.08■□□□□ 0.32
CNTNAP1P78357 FAM197Y6-201ENST00000420524 766 ntBASIC17.08■□□□□ 0.32
CNTNAP1P78357 GTF2I-203ENST00000443166 979 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CNTNAP1P78357 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC17.08■□□□□ 0.32
CNTNAP1P78357 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC17.08■□□□□ 0.32
CNTNAP1P78357 RN7SL288P-201ENST00000490496 291 ntBASIC17.08■□□□□ 0.32
CNTNAP1P78357 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC17.08■□□□□ 0.32
CNTNAP1P78357 AC008026.2-201ENST00000495438 348 ntBASIC17.08■□□□□ 0.32
CNTNAP1P78357 OR2A1-AS1-210ENST00000496968 531 ntBASIC17.08■□□□□ 0.32
CNTNAP1P78357 AC097381.2-201ENST00000510640 859 ntTSL 2 BASIC17.08■□□□□ 0.32
CNTNAP1P78357 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CNTNAP1P78357 SLC9A3R2-204ENST00000563587 1037 ntTSL 2 BASIC17.08■□□□□ 0.32
CNTNAP1P78357 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC17.08■□□□□ 0.32
CNTNAP1P78357 RN7SL665P-201ENST00000578793 300 ntBASIC17.08■□□□□ 0.32
CNTNAP1P78357 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC17.08■□□□□ 0.32
CNTNAP1P78357 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC17.08■□□□□ 0.32
CNTNAP1P78357 AC254633.1-201ENST00000606790 345 ntBASIC17.08■□□□□ 0.32
CNTNAP1P78357 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC17.08■□□□□ 0.32
CNTNAP1P78357 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CNTNAP1P78357 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CNTNAP1P78357 AC006372.4-201ENST00000624122 1543 ntBASIC17.08■□□□□ 0.32
CNTNAP1P78357 AC007491.1-201ENST00000637560 1306 ntTSL 5 BASIC17.08■□□□□ 0.32
CNTNAP1P78357 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC17.08■□□□□ 0.32
CNTNAP1P78357 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC17.08■□□□□ 0.32
CNTNAP1P78357 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CNTNAP1P78357 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CNTNAP1P78357 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CNTNAP1P78357 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CNTNAP1P78357 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CNTNAP1P78357 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.07■□□□□ 0.32
CNTNAP1P78357 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC17.07■□□□□ 0.32
CNTNAP1P78357 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNTNAP1P78357 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CNTNAP1P78357 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC17.07■□□□□ 0.32
CNTNAP1P78357 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNTNAP1P78357 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNTNAP1P78357 PYY2-201ENST00000315776 282 ntBASIC17.07■□□□□ 0.32
CNTNAP1P78357 ATXN3-201ENST00000340660 1205 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CNTNAP1P78357 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CNTNAP1P78357 KIR2DL4-207ENST00000396293 715 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CNTNAP1P78357 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC17.07■□□□□ 0.32
CNTNAP1P78357 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC17.07■□□□□ 0.32
CNTNAP1P78357 EEF1DP5-201ENST00000431410 772 ntBASIC17.07■□□□□ 0.32
CNTNAP1P78357 AC027612.2-202ENST00000445955 1199 ntBASIC17.07■□□□□ 0.32
CNTNAP1P78357 Z82249.1-201ENST00000453866 568 ntTSL 4 BASIC17.07■□□□□ 0.32
CNTNAP1P78357 AC095040.1-201ENST00000513286 675 ntBASIC17.07■□□□□ 0.32
CNTNAP1P78357 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC17.07■□□□□ 0.32
CNTNAP1P78357 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CNTNAP1P78357 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
CNTNAP1P78357 AC013553.1-201ENST00000560906 267 ntBASIC17.07■□□□□ 0.32
CNTNAP1P78357 PSME2-217ENST00000615264 874 ntTSL 5 BASIC17.07■□□□□ 0.32
CNTNAP1P78357 PSME2-218ENST00000630027 185 ntTSL 3 BASIC17.07■□□□□ 0.32
CNTNAP1P78357 HELLS-212ENST00000630929 400 ntTSL 5 BASIC17.07■□□□□ 0.32
CNTNAP1P78357 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNTNAP1P78357 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
CNTNAP1P78357 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC17.07■□□□□ 0.32
CNTNAP1P78357 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC17.07■□□□□ 0.32
CNTNAP1P78357 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.07■□□□□ 0.32
CNTNAP1P78357 TEKT4P2-202ENST00000559466 1312 ntBASIC17.07■□□□□ 0.32
CNTNAP1P78357 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.07■□□□□ 0.32
CNTNAP1P78357 AC006486.2-201ENST00000624246 2199 ntBASIC17.07■□□□□ 0.32
CNTNAP1P78357 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNTNAP1P78357 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC17.07■□□□□ 0.32
CNTNAP1P78357 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC17.07■□□□□ 0.32
CNTNAP1P78357 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNTNAP1P78357 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNTNAP1P78357 AGGF1P1-201ENST00000509500 2073 ntBASIC17.06■□□□□ 0.32
CNTNAP1P78357 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.06■□□□□ 0.32
CNTNAP1P78357 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNTNAP1P78357 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNTNAP1P78357 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC17.06■□□□□ 0.32
CNTNAP1P78357 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CNTNAP1P78357 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNTNAP1P78357 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CNTNAP1P78357 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC17.06■□□□□ 0.32
CNTNAP1P78357 MRPS28-201ENST00000276585 850 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNTNAP1P78357 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC17.06■□□□□ 0.32
CNTNAP1P78357 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CNTNAP1P78357 MAGEA7P-201ENST00000436482 942 ntBASIC17.06■□□□□ 0.32
CNTNAP1P78357 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC17.06■□□□□ 0.32
CNTNAP1P78357 MT2A-202ENST00000561491 581 ntTSL 2 BASIC17.06■□□□□ 0.32
CNTNAP1P78357 AC011489.1-201ENST00000586744 690 ntTSL 3 BASIC17.06■□□□□ 0.32
CNTNAP1P78357 HCG18-241ENST00000602290 821 ntTSL 2 BASIC17.06■□□□□ 0.32
CNTNAP1P78357 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC17.06■□□□□ 0.32
CNTNAP1P78357 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC17.06■□□□□ 0.32
CNTNAP1P78357 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CNTNAP1P78357 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CNTNAP1P78357 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.06■□□□□ 0.32
CNTNAP1P78357 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNTNAP1P78357 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNTNAP1P78357 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNTNAP1P78357 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms