Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
YBX1P67809 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC14.27□□□□□ -0.13
YBX1P67809 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC14.27□□□□□ -0.13
YBX1P67809 VPS18-202ENST00000558474 873 ntTSL 3 BASIC14.27□□□□□ -0.13
YBX1P67809 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC14.27□□□□□ -0.13
YBX1P67809 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC14.27□□□□□ -0.13
YBX1P67809 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC14.27□□□□□ -0.13
YBX1P67809 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
YBX1P67809 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
YBX1P67809 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
YBX1P67809 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
YBX1P67809 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
YBX1P67809 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
YBX1P67809 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
YBX1P67809 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
YBX1P67809 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
YBX1P67809 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC14.27□□□□□ -0.13
YBX1P67809 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
YBX1P67809 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
YBX1P67809 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.27□□□□□ -0.13
YBX1P67809 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
YBX1P67809 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
YBX1P67809 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
YBX1P67809 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
YBX1P67809 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
YBX1P67809 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
YBX1P67809 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
YBX1P67809 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
YBX1P67809 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
YBX1P67809 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
YBX1P67809 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
YBX1P67809 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
YBX1P67809 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
YBX1P67809 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
YBX1P67809 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
YBX1P67809 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
YBX1P67809 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
YBX1P67809 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
YBX1P67809 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC14.26□□□□□ -0.13
YBX1P67809 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC14.26□□□□□ -0.13
YBX1P67809 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
YBX1P67809 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
YBX1P67809 E2F3P2-201ENST00000447755 1422 ntBASIC14.26□□□□□ -0.13
YBX1P67809 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
YBX1P67809 AC067930.6-201ENST00000623257 4947 ntBASIC14.26□□□□□ -0.13
YBX1P67809 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
YBX1P67809 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC14.26□□□□□ -0.13
YBX1P67809 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
YBX1P67809 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
YBX1P67809 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
YBX1P67809 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
YBX1P67809 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
YBX1P67809 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
YBX1P67809 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
YBX1P67809 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
YBX1P67809 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
YBX1P67809 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
YBX1P67809 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
YBX1P67809 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC14.26□□□□□ -0.13
YBX1P67809 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
YBX1P67809 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC14.26□□□□□ -0.13
YBX1P67809 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
YBX1P67809 RPSAP36-202ENST00000494591 1261 ntBASIC14.26□□□□□ -0.13
YBX1P67809 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC14.26□□□□□ -0.13
YBX1P67809 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC14.26□□□□□ -0.13
YBX1P67809 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC14.26□□□□□ -0.13
YBX1P67809 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC14.26□□□□□ -0.13
YBX1P67809 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC14.26□□□□□ -0.13
YBX1P67809 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC14.26□□□□□ -0.13
YBX1P67809 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC14.26□□□□□ -0.13
YBX1P67809 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC14.26□□□□□ -0.13
YBX1P67809 RN7SL560P-201ENST00000577943 264 ntBASIC14.26□□□□□ -0.13
YBX1P67809 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC14.26□□□□□ -0.13
YBX1P67809 AL136301.1-201ENST00000615830 422 ntBASIC14.26□□□□□ -0.13
YBX1P67809 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC14.26□□□□□ -0.13
YBX1P67809 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC14.26□□□□□ -0.13
YBX1P67809 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
YBX1P67809 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
YBX1P67809 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
YBX1P67809 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
YBX1P67809 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
YBX1P67809 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
YBX1P67809 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
YBX1P67809 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
YBX1P67809 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC14.26□□□□□ -0.13
YBX1P67809 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
YBX1P67809 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
YBX1P67809 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
YBX1P67809 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
YBX1P67809 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
YBX1P67809 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC14.26□□□□□ -0.13
YBX1P67809 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
YBX1P67809 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
YBX1P67809 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
YBX1P67809 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
YBX1P67809 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
YBX1P67809 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
YBX1P67809 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
YBX1P67809 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
YBX1P67809 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms