Protein–RNA interactions for Protein: P56703

WNT3, Proto-oncogene Wnt-3, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3P56703 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC13.85□□□□□ -0.19
WNT3P56703 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
WNT3P56703 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
WNT3P56703 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
WNT3P56703 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
WNT3P56703 AC111170.3-201ENST00000624282 2464 ntBASIC13.85□□□□□ -0.19
WNT3P56703 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
WNT3P56703 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC13.85□□□□□ -0.19
WNT3P56703 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
WNT3P56703 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
WNT3P56703 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
WNT3P56703 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC13.85□□□□□ -0.19
WNT3P56703 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
WNT3P56703 GUK1-206ENST00000366723 845 ntTSL 5 BASIC13.85□□□□□ -0.19
WNT3P56703 AC092933.1-201ENST00000393644 945 ntBASIC13.85□□□□□ -0.19
WNT3P56703 AC099336.1-201ENST00000417053 1171 ntBASIC13.85□□□□□ -0.19
WNT3P56703 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
WNT3P56703 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC13.85□□□□□ -0.19
WNT3P56703 AL355864.2-201ENST00000447420 863 ntBASIC13.85□□□□□ -0.19
WNT3P56703 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
WNT3P56703 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC13.85□□□□□ -0.19
WNT3P56703 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC13.85□□□□□ -0.19
WNT3P56703 RPL28-206ENST00000558752 671 ntTSL 3 BASIC13.85□□□□□ -0.19
WNT3P56703 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC13.85□□□□□ -0.19
WNT3P56703 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC13.85□□□□□ -0.19
WNT3P56703 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC13.85□□□□□ -0.19
WNT3P56703 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC13.85□□□□□ -0.19
WNT3P56703 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC13.85□□□□□ -0.19
WNT3P56703 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
WNT3P56703 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
WNT3P56703 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
WNT3P56703 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
WNT3P56703 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
WNT3P56703 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
WNT3P56703 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
WNT3P56703 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
WNT3P56703 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
WNT3P56703 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
WNT3P56703 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC13.85□□□□□ -0.19
WNT3P56703 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
WNT3P56703 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
WNT3P56703 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
WNT3P56703 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
WNT3P56703 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
WNT3P56703 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
WNT3P56703 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
WNT3P56703 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
WNT3P56703 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
WNT3P56703 FLJ16779-201ENST00000612722 7638 ntBASIC13.84□□□□□ -0.19
WNT3P56703 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
WNT3P56703 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
WNT3P56703 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
WNT3P56703 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC13.84□□□□□ -0.19
WNT3P56703 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
WNT3P56703 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
WNT3P56703 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
WNT3P56703 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
WNT3P56703 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
WNT3P56703 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
WNT3P56703 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
WNT3P56703 BOLA2P3-201ENST00000404566 256 ntBASIC13.84□□□□□ -0.19
WNT3P56703 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC13.84□□□□□ -0.19
WNT3P56703 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
WNT3P56703 AL161932.2-201ENST00000435436 679 ntBASIC13.84□□□□□ -0.19
WNT3P56703 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC13.84□□□□□ -0.19
WNT3P56703 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
WNT3P56703 AL590640.2-201ENST00000457038 527 ntBASIC13.84□□□□□ -0.19
WNT3P56703 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
WNT3P56703 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC13.84□□□□□ -0.19
WNT3P56703 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC13.84□□□□□ -0.19
WNT3P56703 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
WNT3P56703 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC13.84□□□□□ -0.19
WNT3P56703 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC13.84□□□□□ -0.19
WNT3P56703 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC13.84□□□□□ -0.19
WNT3P56703 AC027237.1-201ENST00000560942 655 ntBASIC13.84□□□□□ -0.19
WNT3P56703 MIR4683-201ENST00000579659 81 ntBASIC13.84□□□□□ -0.19
WNT3P56703 MIR6799-201ENST00000620297 69 ntBASIC13.84□□□□□ -0.19
WNT3P56703 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
WNT3P56703 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC13.84□□□□□ -0.19
WNT3P56703 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
WNT3P56703 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC13.84□□□□□ -0.19
WNT3P56703 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
WNT3P56703 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
WNT3P56703 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC13.84□□□□□ -0.19
WNT3P56703 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
WNT3P56703 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
WNT3P56703 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC13.83□□□□□ -0.19
WNT3P56703 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
WNT3P56703 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
WNT3P56703 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.83□□□□□ -0.19
WNT3P56703 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
WNT3P56703 AL022313.4-201ENST00000562756 2046 ntBASIC13.83□□□□□ -0.2
WNT3P56703 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
WNT3P56703 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
WNT3P56703 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
WNT3P56703 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
WNT3P56703 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC13.83□□□□□ -0.2
WNT3P56703 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC13.83□□□□□ -0.2
WNT3P56703 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
WNT3P56703 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms