Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PKNOX1P55347 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
PKNOX1P55347 MYCLP2-201ENST00000449268 967 ntBASIC14.45□□□□□ -0.1
PKNOX1P55347 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC14.45□□□□□ -0.1
PKNOX1P55347 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC14.45□□□□□ -0.1
PKNOX1P55347 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC14.45□□□□□ -0.1
PKNOX1P55347 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC14.45□□□□□ -0.1
PKNOX1P55347 KRT8P24-201ENST00000560290 1559 ntBASIC14.45□□□□□ -0.1
PKNOX1P55347 AC138761.1-201ENST00000584393 385 ntBASIC14.45□□□□□ -0.1
PKNOX1P55347 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.45□□□□□ -0.1
PKNOX1P55347 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC14.45□□□□□ -0.1
PKNOX1P55347 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC14.45□□□□□ -0.1
PKNOX1P55347 INE2-201ENST00000630399 1874 ntBASIC14.45□□□□□ -0.1
PKNOX1P55347 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
PKNOX1P55347 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
PKNOX1P55347 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PKNOX1P55347 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PKNOX1P55347 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
PKNOX1P55347 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PKNOX1P55347 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PKNOX1P55347 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PKNOX1P55347 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PKNOX1P55347 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PKNOX1P55347 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC14.44□□□□□ -0.1
PKNOX1P55347 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
PKNOX1P55347 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
PKNOX1P55347 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PKNOX1P55347 KRT8P35-201ENST00000483942 1338 ntBASIC14.44□□□□□ -0.1
PKNOX1P55347 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.44□□□□□ -0.1
PKNOX1P55347 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PKNOX1P55347 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PKNOX1P55347 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC14.44□□□□□ -0.1
PKNOX1P55347 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PKNOX1P55347 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PKNOX1P55347 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
PKNOX1P55347 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PKNOX1P55347 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PKNOX1P55347 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
PKNOX1P55347 AC019294.4-201ENST00000561777 2905 ntBASIC14.44□□□□□ -0.1
PKNOX1P55347 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
PKNOX1P55347 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PKNOX1P55347 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PKNOX1P55347 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PKNOX1P55347 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
PKNOX1P55347 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC14.44□□□□□ -0.1
PKNOX1P55347 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PKNOX1P55347 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PKNOX1P55347 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.44□□□□□ -0.1
PKNOX1P55347 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PKNOX1P55347 AL162726.2-201ENST00000438986 1017 ntBASIC14.44□□□□□ -0.1
PKNOX1P55347 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC14.44□□□□□ -0.1
PKNOX1P55347 VPS18-202ENST00000558474 873 ntTSL 3 BASIC14.44□□□□□ -0.1
PKNOX1P55347 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PKNOX1P55347 AL132655.2-201ENST00000596276 594 ntBASIC14.44□□□□□ -0.1
PKNOX1P55347 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PKNOX1P55347 WARS-203ENST00000358655 2466 ntTSL 2 BASIC14.44□□□□□ -0.1
PKNOX1P55347 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC14.44□□□□□ -0.1
PKNOX1P55347 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
PKNOX1P55347 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC14.44□□□□□ -0.1
PKNOX1P55347 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
PKNOX1P55347 RN7SL832P-201ENST00000607781 1756 ntBASIC14.44□□□□□ -0.1
PKNOX1P55347 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PKNOX1P55347 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14.44□□□□□ -0.1
PKNOX1P55347 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC14.44□□□□□ -0.1
PKNOX1P55347 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
PKNOX1P55347 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC14.44□□□□□ -0.1
PKNOX1P55347 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
PKNOX1P55347 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PKNOX1P55347 AC007541.1-201ENST00000570282 1469 ntBASIC14.44□□□□□ -0.1
PKNOX1P55347 AC020910.6-201ENST00000623084 1459 ntBASIC14.44□□□□□ -0.1
PKNOX1P55347 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
PKNOX1P55347 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
PKNOX1P55347 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
PKNOX1P55347 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC14.43□□□□□ -0.1
PKNOX1P55347 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
PKNOX1P55347 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC14.43□□□□□ -0.1
PKNOX1P55347 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PKNOX1P55347 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
PKNOX1P55347 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC14.43□□□□□ -0.1
PKNOX1P55347 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC14.43□□□□□ -0.1
PKNOX1P55347 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
PKNOX1P55347 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PKNOX1P55347 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
PKNOX1P55347 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PKNOX1P55347 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PKNOX1P55347 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
PKNOX1P55347 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PKNOX1P55347 TCAM1P-207ENST00000485295 1537 ntBASIC14.43□□□□□ -0.1
PKNOX1P55347 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PKNOX1P55347 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PKNOX1P55347 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PKNOX1P55347 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
PKNOX1P55347 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PKNOX1P55347 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PKNOX1P55347 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
PKNOX1P55347 UGT1A2P-201ENST00000454886 866 ntBASIC14.43□□□□□ -0.1
PKNOX1P55347 FO681548.1-201ENST00000455617 1132 ntBASIC14.43□□□□□ -0.1
PKNOX1P55347 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
PKNOX1P55347 GCOM2-201ENST00000509133 1104 ntBASIC14.43□□□□□ -0.1
PKNOX1P55347 SERBP1P5-201ENST00000510079 1181 ntBASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms