Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDKN2DP55273 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDKN2DP55273 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CDKN2DP55273 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CDKN2DP55273 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CDKN2DP55273 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CDKN2DP55273 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CDKN2DP55273 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
CDKN2DP55273 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CDKN2DP55273 PDIA3P1-201ENST00000471856 1510 ntBASIC14.46□□□□□ -0.1
CDKN2DP55273 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDKN2DP55273 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CDKN2DP55273 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDKN2DP55273 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDKN2DP55273 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDKN2DP55273 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDKN2DP55273 AL157996.1-201ENST00000624684 2299 ntBASIC14.45□□□□□ -0.1
CDKN2DP55273 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDKN2DP55273 AHCYP2-201ENST00000430630 1300 ntBASIC14.45□□□□□ -0.1
CDKN2DP55273 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CDKN2DP55273 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CDKN2DP55273 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDKN2DP55273 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CDKN2DP55273 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDKN2DP55273 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC14.45□□□□□ -0.1
CDKN2DP55273 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
CDKN2DP55273 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC14.45□□□□□ -0.1
CDKN2DP55273 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
CDKN2DP55273 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.45□□□□□ -0.1
CDKN2DP55273 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CDKN2DP55273 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDKN2DP55273 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
CDKN2DP55273 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDKN2DP55273 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDKN2DP55273 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CDKN2DP55273 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC14.45□□□□□ -0.1
CDKN2DP55273 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDKN2DP55273 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CDKN2DP55273 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC14.45□□□□□ -0.1
CDKN2DP55273 PGF-202ENST00000405431 666 ntTSL 5 BASIC14.45□□□□□ -0.1
CDKN2DP55273 AL035633.1-201ENST00000406139 838 ntBASIC14.45□□□□□ -0.1
CDKN2DP55273 AC010141.1-201ENST00000411585 623 ntBASIC14.45□□□□□ -0.1
CDKN2DP55273 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CDKN2DP55273 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC14.45□□□□□ -0.1
CDKN2DP55273 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC14.45□□□□□ -0.1
CDKN2DP55273 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC14.45□□□□□ -0.1
CDKN2DP55273 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CDKN2DP55273 GSAP-205ENST00000430584 600 ntTSL 5 BASIC14.45□□□□□ -0.1
CDKN2DP55273 KRT43P-201ENST00000434019 910 ntBASIC14.45□□□□□ -0.1
CDKN2DP55273 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC14.45□□□□□ -0.1
CDKN2DP55273 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.45□□□□□ -0.1
CDKN2DP55273 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
CDKN2DP55273 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CDKN2DP55273 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC14.45□□□□□ -0.1
CDKN2DP55273 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CDKN2DP55273 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC14.45□□□□□ -0.1
CDKN2DP55273 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC14.45□□□□□ -0.1
CDKN2DP55273 AP000812.2-201ENST00000538934 718 ntBASIC14.45□□□□□ -0.1
CDKN2DP55273 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC14.45□□□□□ -0.1
CDKN2DP55273 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC14.45□□□□□ -0.1
CDKN2DP55273 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC14.45□□□□□ -0.1
CDKN2DP55273 AC008825.2-201ENST00000603374 718 ntBASIC14.45□□□□□ -0.1
CDKN2DP55273 AL136301.1-201ENST00000615830 422 ntBASIC14.45□□□□□ -0.1
CDKN2DP55273 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC14.45□□□□□ -0.1
CDKN2DP55273 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
CDKN2DP55273 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CDKN2DP55273 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CDKN2DP55273 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CDKN2DP55273 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
CDKN2DP55273 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.45□□□□□ -0.1
CDKN2DP55273 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDKN2DP55273 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC14.45□□□□□ -0.1
CDKN2DP55273 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDKN2DP55273 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDKN2DP55273 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC14.44□□□□□ -0.1
CDKN2DP55273 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDKN2DP55273 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDKN2DP55273 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDKN2DP55273 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDKN2DP55273 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC14.44□□□□□ -0.1
CDKN2DP55273 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC14.44□□□□□ -0.1
CDKN2DP55273 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
CDKN2DP55273 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
CDKN2DP55273 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDKN2DP55273 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC14.44□□□□□ -0.1
CDKN2DP55273 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDKN2DP55273 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CDKN2DP55273 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CDKN2DP55273 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDKN2DP55273 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CDKN2DP55273 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
CDKN2DP55273 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC14.44□□□□□ -0.1
CDKN2DP55273 HNRNPA1P27-201ENST00000412087 955 ntBASIC14.44□□□□□ -0.1
CDKN2DP55273 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC14.44□□□□□ -0.1
CDKN2DP55273 AL035414.1-201ENST00000451327 857 ntBASIC14.44□□□□□ -0.1
CDKN2DP55273 KRT17P7-201ENST00000451704 1104 ntBASIC14.44□□□□□ -0.1
CDKN2DP55273 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC14.44□□□□□ -0.1
CDKN2DP55273 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC14.44□□□□□ -0.1
CDKN2DP55273 ORC6-206ENST00000568364 888 ntTSL 5 BASIC14.44□□□□□ -0.1
CDKN2DP55273 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms