Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC13.69□□□□□ -0.22
EFNA3P52797 RCC2P8-201ENST00000502779 1035 ntBASIC13.69□□□□□ -0.22
EFNA3P52797 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC13.69□□□□□ -0.22
EFNA3P52797 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC13.69□□□□□ -0.22
EFNA3P52797 RN7SL574P-201ENST00000581512 297 ntBASIC13.69□□□□□ -0.22
EFNA3P52797 AL157813.1-201ENST00000612996 587 ntBASIC13.69□□□□□ -0.22
EFNA3P52797 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
EFNA3P52797 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC13.69□□□□□ -0.22
EFNA3P52797 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
EFNA3P52797 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
EFNA3P52797 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
EFNA3P52797 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
EFNA3P52797 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
EFNA3P52797 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
EFNA3P52797 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
EFNA3P52797 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
EFNA3P52797 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
EFNA3P52797 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
EFNA3P52797 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
EFNA3P52797 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.69□□□□□ -0.22
EFNA3P52797 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
EFNA3P52797 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
EFNA3P52797 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
EFNA3P52797 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
EFNA3P52797 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
EFNA3P52797 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
EFNA3P52797 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC13.68□□□□□ -0.22
EFNA3P52797 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
EFNA3P52797 AGGF1P1-201ENST00000509500 2073 ntBASIC13.68□□□□□ -0.22
EFNA3P52797 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
EFNA3P52797 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC13.68□□□□□ -0.22
EFNA3P52797 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
EFNA3P52797 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
EFNA3P52797 AC140479.7-201ENST00000636301 2332 ntBASIC13.68□□□□□ -0.22
EFNA3P52797 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
EFNA3P52797 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
EFNA3P52797 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
EFNA3P52797 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
EFNA3P52797 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
EFNA3P52797 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC13.68□□□□□ -0.22
EFNA3P52797 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
EFNA3P52797 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
EFNA3P52797 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
EFNA3P52797 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
EFNA3P52797 AC078875.1-201ENST00000431907 724 ntBASIC13.68□□□□□ -0.22
EFNA3P52797 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
EFNA3P52797 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC13.68□□□□□ -0.22
EFNA3P52797 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
EFNA3P52797 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
EFNA3P52797 RBM8B-201ENST00000555532 525 ntBASIC13.68□□□□□ -0.22
EFNA3P52797 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC13.68□□□□□ -0.22
EFNA3P52797 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC13.68□□□□□ -0.22
EFNA3P52797 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC13.68□□□□□ -0.22
EFNA3P52797 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC13.68□□□□□ -0.22
EFNA3P52797 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
EFNA3P52797 MIR3619-201ENST00000579667 83 ntBASIC13.68□□□□□ -0.22
EFNA3P52797 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
EFNA3P52797 AC097724.1-201ENST00000609581 426 ntBASIC13.68□□□□□ -0.22
EFNA3P52797 MEG3_2.1-201ENST00000611456 105 ntBASIC13.68□□□□□ -0.22
EFNA3P52797 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC13.68□□□□□ -0.22
EFNA3P52797 AL805961.1-203ENST00000641078 1258 ntBASIC13.68□□□□□ -0.22
EFNA3P52797 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
EFNA3P52797 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
EFNA3P52797 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
EFNA3P52797 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
EFNA3P52797 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
EFNA3P52797 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
EFNA3P52797 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
EFNA3P52797 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
EFNA3P52797 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.68□□□□□ -0.22
EFNA3P52797 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
EFNA3P52797 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
EFNA3P52797 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
EFNA3P52797 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
EFNA3P52797 MYADML-201ENST00000474610 2147 ntBASIC13.67□□□□□ -0.22
EFNA3P52797 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
EFNA3P52797 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
EFNA3P52797 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
EFNA3P52797 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC13.67□□□□□ -0.22
EFNA3P52797 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC13.67□□□□□ -0.22
EFNA3P52797 AC215219.1-201ENST00000400706 1817 ntBASIC13.67□□□□□ -0.22
EFNA3P52797 AC009093.10-201ENST00000641956 1442 ntBASIC13.67□□□□□ -0.22
EFNA3P52797 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
EFNA3P52797 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
EFNA3P52797 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC13.67□□□□□ -0.22
EFNA3P52797 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
EFNA3P52797 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
EFNA3P52797 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
EFNA3P52797 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
EFNA3P52797 HNRNPA1P41-201ENST00000397777 928 ntBASIC13.67□□□□□ -0.22
EFNA3P52797 OR2R1P-201ENST00000441404 914 ntBASIC13.67□□□□□ -0.22
EFNA3P52797 AL596276.2-201ENST00000447525 331 ntBASIC13.67□□□□□ -0.22
EFNA3P52797 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC13.67□□□□□ -0.22
EFNA3P52797 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC13.67□□□□□ -0.22
EFNA3P52797 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC13.67□□□□□ -0.22
EFNA3P52797 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
EFNA3P52797 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC13.67□□□□□ -0.22
EFNA3P52797 IGHVIII-5-2-201ENST00000522505 261 ntBASIC13.67□□□□□ -0.22
EFNA3P52797 AC003686.1-201ENST00000550956 1034 ntBASIC13.67□□□□□ -0.22
EFNA3P52797 SYT17-208ENST00000568433 812 ntTSL 3 BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms