Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RNF144AP50876 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
RNF144AP50876 AC092135.3-201ENST00000624151 1846 ntBASIC13.72□□□□□ -0.21
RNF144AP50876 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.72□□□□□ -0.21
RNF144AP50876 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RNF144AP50876 TPM3P8-201ENST00000330554 643 ntBASIC13.72□□□□□ -0.21
RNF144AP50876 MPV17-205ENST00000402310 906 ntTSL 5 BASIC13.72□□□□□ -0.21
RNF144AP50876 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC13.72□□□□□ -0.21
RNF144AP50876 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC13.72□□□□□ -0.21
RNF144AP50876 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC13.72□□□□□ -0.21
RNF144AP50876 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC13.72□□□□□ -0.21
RNF144AP50876 AC025279.2-201ENST00000569730 653 ntBASIC13.72□□□□□ -0.21
RNF144AP50876 RN7SL440P-201ENST00000577855 343 ntBASIC13.72□□□□□ -0.21
RNF144AP50876 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC13.72□□□□□ -0.21
RNF144AP50876 AC233724.13-201ENST00000598383 410 ntBASIC13.72□□□□□ -0.21
RNF144AP50876 AC137695.1-201ENST00000604126 489 ntBASIC13.72□□□□□ -0.21
RNF144AP50876 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RNF144AP50876 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
RNF144AP50876 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC13.72□□□□□ -0.21
RNF144AP50876 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC13.72□□□□□ -0.21
RNF144AP50876 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC13.72□□□□□ -0.21
RNF144AP50876 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RNF144AP50876 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.72□□□□□ -0.21
RNF144AP50876 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.72□□□□□ -0.21
RNF144AP50876 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RNF144AP50876 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RNF144AP50876 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
RNF144AP50876 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
RNF144AP50876 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RNF144AP50876 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
RNF144AP50876 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
RNF144AP50876 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
RNF144AP50876 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
RNF144AP50876 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
RNF144AP50876 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RNF144AP50876 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC13.72□□□□□ -0.21
RNF144AP50876 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RNF144AP50876 CU639417.3-201ENST00000624240 1404 ntBASIC13.72□□□□□ -0.21
RNF144AP50876 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
RNF144AP50876 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
RNF144AP50876 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RNF144AP50876 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC13.72□□□□□ -0.21
RNF144AP50876 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
RNF144AP50876 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC13.72□□□□□ -0.21
RNF144AP50876 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
RNF144AP50876 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RNF144AP50876 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RNF144AP50876 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
RNF144AP50876 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RNF144AP50876 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC13.71□□□□□ -0.21
RNF144AP50876 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.21
RNF144AP50876 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RNF144AP50876 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RNF144AP50876 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RNF144AP50876 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
RNF144AP50876 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RNF144AP50876 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RNF144AP50876 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RNF144AP50876 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
RNF144AP50876 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RNF144AP50876 GRAP-202ENST00000395635 834 ntTSL 2 BASIC13.71□□□□□ -0.21
RNF144AP50876 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC13.71□□□□□ -0.21
RNF144AP50876 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RNF144AP50876 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC13.71□□□□□ -0.21
RNF144AP50876 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC13.71□□□□□ -0.21
RNF144AP50876 AC078819.1-201ENST00000547454 765 ntBASIC13.71□□□□□ -0.21
RNF144AP50876 AC012085.1-201ENST00000548270 765 ntBASIC13.71□□□□□ -0.21
RNF144AP50876 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.71□□□□□ -0.21
RNF144AP50876 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC13.71□□□□□ -0.21
RNF144AP50876 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC13.71□□□□□ -0.21
RNF144AP50876 AC005225.4-201ENST00000557330 545 ntBASIC13.71□□□□□ -0.21
RNF144AP50876 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC13.71□□□□□ -0.21
RNF144AP50876 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC13.71□□□□□ -0.21
RNF144AP50876 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC13.71□□□□□ -0.21
RNF144AP50876 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RNF144AP50876 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC13.71□□□□□ -0.21
RNF144AP50876 MIR4683-201ENST00000579659 81 ntBASIC13.71□□□□□ -0.21
RNF144AP50876 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
RNF144AP50876 BTNL10-201ENST00000595971 695 ntBASIC13.71□□□□□ -0.21
RNF144AP50876 OR10B1P-201ENST00000601666 907 ntBASIC13.71□□□□□ -0.21
RNF144AP50876 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC13.71□□□□□ -0.21
RNF144AP50876 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC13.71□□□□□ -0.21
RNF144AP50876 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC13.71□□□□□ -0.21
RNF144AP50876 AC138466.3-201ENST00000619983 221 ntBASIC13.71□□□□□ -0.21
RNF144AP50876 AC138951.2-201ENST00000623455 1161 ntBASIC13.71□□□□□ -0.21
RNF144AP50876 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
RNF144AP50876 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.71□□□□□ -0.21
RNF144AP50876 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
RNF144AP50876 AC040160.2-201ENST00000623816 1675 ntBASIC13.71□□□□□ -0.21
RNF144AP50876 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RNF144AP50876 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
RNF144AP50876 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RNF144AP50876 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC13.71□□□□□ -0.22
RNF144AP50876 AC015802.1-201ENST00000588104 1449 ntBASIC13.71□□□□□ -0.22
RNF144AP50876 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
RNF144AP50876 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
RNF144AP50876 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
RNF144AP50876 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13.71□□□□□ -0.22
RNF144AP50876 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RNF144AP50876 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms