Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CSNK1A1P48729 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CSNK1A1P48729 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CSNK1A1P48729 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC13.09□□□□□ -0.31
CSNK1A1P48729 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CSNK1A1P48729 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
CSNK1A1P48729 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.31
CSNK1A1P48729 CICP4-201ENST00000447359 2812 ntBASIC13.08□□□□□ -0.31
CSNK1A1P48729 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
CSNK1A1P48729 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.31
CSNK1A1P48729 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CSNK1A1P48729 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC13.08□□□□□ -0.32
CSNK1A1P48729 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.08□□□□□ -0.32
CSNK1A1P48729 AC104581.4-201ENST00000623126 3052 ntBASIC13.08□□□□□ -0.32
CSNK1A1P48729 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CSNK1A1P48729 UCKL1-AS1-201ENST00000623569 3602 ntBASIC13.08□□□□□ -0.32
CSNK1A1P48729 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CSNK1A1P48729 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CSNK1A1P48729 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CSNK1A1P48729 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
CSNK1A1P48729 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC13.08□□□□□ -0.32
CSNK1A1P48729 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC13.08□□□□□ -0.32
CSNK1A1P48729 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC13.08□□□□□ -0.32
CSNK1A1P48729 MPV17-206ENST00000402722 827 ntTSL 3 BASIC13.08□□□□□ -0.32
CSNK1A1P48729 RGS5-214ENST00000429865 754 ntTSL 3 BASIC13.08□□□□□ -0.32
CSNK1A1P48729 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC13.08□□□□□ -0.32
CSNK1A1P48729 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
CSNK1A1P48729 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC13.08□□□□□ -0.32
CSNK1A1P48729 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC13.08□□□□□ -0.32
CSNK1A1P48729 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
CSNK1A1P48729 WNT11-204ENST00000621122 789 ntTSL 5 BASIC13.08□□□□□ -0.32
CSNK1A1P48729 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.08□□□□□ -0.32
CSNK1A1P48729 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
CSNK1A1P48729 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CSNK1A1P48729 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
CSNK1A1P48729 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CSNK1A1P48729 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.08□□□□□ -0.32
CSNK1A1P48729 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
CSNK1A1P48729 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC13.08□□□□□ -0.32
CSNK1A1P48729 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CSNK1A1P48729 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.08□□□□□ -0.32
CSNK1A1P48729 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
CSNK1A1P48729 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CSNK1A1P48729 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC13.08□□□□□ -0.32
CSNK1A1P48729 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
CSNK1A1P48729 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
CSNK1A1P48729 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CSNK1A1P48729 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
CSNK1A1P48729 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CSNK1A1P48729 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
CSNK1A1P48729 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
CSNK1A1P48729 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
CSNK1A1P48729 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC13.07□□□□□ -0.32
CSNK1A1P48729 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
CSNK1A1P48729 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CSNK1A1P48729 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CSNK1A1P48729 KHSRPP1-201ENST00000427983 1768 ntBASIC13.07□□□□□ -0.32
CSNK1A1P48729 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
CSNK1A1P48729 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
CSNK1A1P48729 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.07□□□□□ -0.32
CSNK1A1P48729 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC13.07□□□□□ -0.32
CSNK1A1P48729 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
CSNK1A1P48729 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CSNK1A1P48729 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CSNK1A1P48729 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CSNK1A1P48729 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CSNK1A1P48729 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC13.07□□□□□ -0.32
CSNK1A1P48729 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
CSNK1A1P48729 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
CSNK1A1P48729 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CSNK1A1P48729 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CSNK1A1P48729 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.07□□□□□ -0.32
CSNK1A1P48729 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CSNK1A1P48729 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CSNK1A1P48729 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CSNK1A1P48729 AC079776.1-201ENST00000401540 1152 ntBASIC13.07□□□□□ -0.32
CSNK1A1P48729 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
CSNK1A1P48729 AC026954.1-201ENST00000429771 1293 ntBASIC13.07□□□□□ -0.32
CSNK1A1P48729 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CSNK1A1P48729 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC13.07□□□□□ -0.32
CSNK1A1P48729 CNN2P10-201ENST00000443067 918 ntBASIC13.07□□□□□ -0.32
CSNK1A1P48729 ACA64.2-201ENST00000459014 129 ntBASIC13.07□□□□□ -0.32
CSNK1A1P48729 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC13.07□□□□□ -0.32
CSNK1A1P48729 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
CSNK1A1P48729 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
CSNK1A1P48729 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC13.07□□□□□ -0.32
CSNK1A1P48729 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC13.07□□□□□ -0.32
CSNK1A1P48729 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC13.07□□□□□ -0.32
CSNK1A1P48729 C2orf69P2-201ENST00000562032 1123 ntBASIC13.07□□□□□ -0.32
CSNK1A1P48729 AP006547.1-201ENST00000563435 692 ntBASIC13.07□□□□□ -0.32
CSNK1A1P48729 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC13.07□□□□□ -0.32
CSNK1A1P48729 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC13.07□□□□□ -0.32
CSNK1A1P48729 AL358472.3-201ENST00000608147 415 ntBASIC13.07□□□□□ -0.32
CSNK1A1P48729 MIR6074-201ENST00000612054 107 ntBASIC13.07□□□□□ -0.32
CSNK1A1P48729 AL136301.1-201ENST00000615830 422 ntBASIC13.07□□□□□ -0.32
CSNK1A1P48729 AC008687.7-202ENST00000637404 953 ntBASIC13.07□□□□□ -0.32
CSNK1A1P48729 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CSNK1A1P48729 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CSNK1A1P48729 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
CSNK1A1P48729 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms