Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC14.87□□□□□ -0.03
RPA3P35244 AL033527.5-201ENST00000641382 801 ntBASIC14.87□□□□□ -0.03
RPA3P35244 AGAP10P-201ENST00000454844 2418 ntBASIC14.87□□□□□ -0.03
RPA3P35244 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPA3P35244 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPA3P35244 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
RPA3P35244 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPA3P35244 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPA3P35244 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
RPA3P35244 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPA3P35244 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPA3P35244 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC14.87□□□□□ -0.03
RPA3P35244 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPA3P35244 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPA3P35244 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPA3P35244 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RPA3P35244 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
RPA3P35244 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC14.87□□□□□ -0.03
RPA3P35244 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPA3P35244 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
RPA3P35244 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RPA3P35244 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RPA3P35244 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
RPA3P35244 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RPA3P35244 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RPA3P35244 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC14.86□□□□□ -0.03
RPA3P35244 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RPA3P35244 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RPA3P35244 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RPA3P35244 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC14.86□□□□□ -0.03
RPA3P35244 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RPA3P35244 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RPA3P35244 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RPA3P35244 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
RPA3P35244 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
RPA3P35244 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
RPA3P35244 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RPA3P35244 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RPA3P35244 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RPA3P35244 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
RPA3P35244 EDF1-203ENST00000371649 790 ntTSL 2 BASIC14.86□□□□□ -0.03
RPA3P35244 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
RPA3P35244 AL035633.1-201ENST00000406139 838 ntBASIC14.86□□□□□ -0.03
RPA3P35244 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RPA3P35244 RN7SL752P-201ENST00000463779 287 ntBASIC14.86□□□□□ -0.03
RPA3P35244 AC011495.1-201ENST00000498085 584 ntBASIC14.86□□□□□ -0.03
RPA3P35244 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.86□□□□□ -0.03
RPA3P35244 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC14.86□□□□□ -0.03
RPA3P35244 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RPA3P35244 ENPP7P5-201ENST00000541031 1031 ntBASIC14.86□□□□□ -0.03
RPA3P35244 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC14.86□□□□□ -0.03
RPA3P35244 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
RPA3P35244 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
RPA3P35244 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
RPA3P35244 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC14.86□□□□□ -0.03
RPA3P35244 PAM16-204ENST00000571941 674 ntTSL 3 BASIC14.86□□□□□ -0.03
RPA3P35244 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
RPA3P35244 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC14.86□□□□□ -0.03
RPA3P35244 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.86□□□□□ -0.03
RPA3P35244 BX539320.1-201ENST00000623759 877 ntBASIC14.86□□□□□ -0.03
RPA3P35244 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RPA3P35244 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
RPA3P35244 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RPA3P35244 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC14.86□□□□□ -0.03
RPA3P35244 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RPA3P35244 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
RPA3P35244 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RPA3P35244 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RPA3P35244 AC015909.5-201ENST00000624336 2266 ntBASIC14.86□□□□□ -0.03
RPA3P35244 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RPA3P35244 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC14.86□□□□□ -0.03
RPA3P35244 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
RPA3P35244 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RPA3P35244 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
RPA3P35244 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RPA3P35244 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
RPA3P35244 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RPA3P35244 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
RPA3P35244 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RPA3P35244 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RPA3P35244 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC14.85□□□□□ -0.03
RPA3P35244 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
RPA3P35244 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
RPA3P35244 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC14.85□□□□□ -0.03
RPA3P35244 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
RPA3P35244 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RPA3P35244 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RPA3P35244 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RPA3P35244 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC14.85□□□□□ -0.03
RPA3P35244 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
RPA3P35244 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC14.85□□□□□ -0.03
RPA3P35244 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RPA3P35244 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RPA3P35244 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
RPA3P35244 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.85□□□□□ -0.03
RPA3P35244 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RPA3P35244 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RPA3P35244 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RPA3P35244 MPV17-208ENST00000405076 603 ntTSL 5 BASIC14.85□□□□□ -0.03
RPA3P35244 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms