Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CHRNA3P32297 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CHRNA3P32297 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC15.5■□□□□ 0.07
CHRNA3P32297 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CHRNA3P32297 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC15.5■□□□□ 0.07
CHRNA3P32297 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC15.5■□□□□ 0.07
CHRNA3P32297 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CHRNA3P32297 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC15.5■□□□□ 0.07
CHRNA3P32297 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC15.5■□□□□ 0.07
CHRNA3P32297 ZBTB12BP-201ENST00000314232 1122 ntBASIC15.5■□□□□ 0.07
CHRNA3P32297 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC15.5■□□□□ 0.07
CHRNA3P32297 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC15.5■□□□□ 0.07
CHRNA3P32297 AL139094.1-201ENST00000405549 1188 ntBASIC15.5■□□□□ 0.07
CHRNA3P32297 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC15.5■□□□□ 0.07
CHRNA3P32297 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC15.5■□□□□ 0.07
CHRNA3P32297 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC15.5■□□□□ 0.07
CHRNA3P32297 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC15.5■□□□□ 0.07
CHRNA3P32297 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC15.5■□□□□ 0.07
CHRNA3P32297 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CHRNA3P32297 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CHRNA3P32297 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC15.5■□□□□ 0.07
CHRNA3P32297 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC15.5■□□□□ 0.07
CHRNA3P32297 AP000812.2-201ENST00000538934 718 ntBASIC15.5■□□□□ 0.07
CHRNA3P32297 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC15.5■□□□□ 0.07
CHRNA3P32297 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC15.5■□□□□ 0.07
CHRNA3P32297 MIR6074-201ENST00000612054 107 ntBASIC15.5■□□□□ 0.07
CHRNA3P32297 AC145423.3-201ENST00000615987 467 ntBASIC15.5■□□□□ 0.07
CHRNA3P32297 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC15.5■□□□□ 0.07
CHRNA3P32297 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CHRNA3P32297 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CHRNA3P32297 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CHRNA3P32297 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CHRNA3P32297 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
CHRNA3P32297 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CHRNA3P32297 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
CHRNA3P32297 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC15.5■□□□□ 0.07
CHRNA3P32297 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CHRNA3P32297 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CHRNA3P32297 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC15.5■□□□□ 0.07
CHRNA3P32297 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CHRNA3P32297 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC15.5■□□□□ 0.07
CHRNA3P32297 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CHRNA3P32297 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CHRNA3P32297 NIN-202ENST00000324330 4364 ntTSL 5 BASIC15.5■□□□□ 0.07
CHRNA3P32297 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHRNA3P32297 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHRNA3P32297 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CHRNA3P32297 AC126335.2-201ENST00000623362 4637 ntBASIC15.49■□□□□ 0.07
CHRNA3P32297 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHRNA3P32297 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CHRNA3P32297 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CHRNA3P32297 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHRNA3P32297 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
CHRNA3P32297 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHRNA3P32297 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CHRNA3P32297 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
CHRNA3P32297 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CHRNA3P32297 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHRNA3P32297 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHRNA3P32297 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC15.49■□□□□ 0.07
CHRNA3P32297 STX1A-203ENST00000395155 783 ntTSL 2 BASIC15.49■□□□□ 0.07
CHRNA3P32297 TLE1P1-201ENST00000422965 589 ntBASIC15.49■□□□□ 0.07
CHRNA3P32297 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC15.49■□□□□ 0.07
CHRNA3P32297 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
CHRNA3P32297 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHRNA3P32297 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC15.49■□□□□ 0.07
CHRNA3P32297 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC15.49■□□□□ 0.07
CHRNA3P32297 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC15.49■□□□□ 0.07
CHRNA3P32297 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CHRNA3P32297 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC15.49■□□□□ 0.07
CHRNA3P32297 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC15.49■□□□□ 0.07
CHRNA3P32297 AC025279.2-201ENST00000569730 653 ntBASIC15.49■□□□□ 0.07
CHRNA3P32297 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CHRNA3P32297 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC15.49■□□□□ 0.07
CHRNA3P32297 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHRNA3P32297 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
CHRNA3P32297 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CHRNA3P32297 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC15.49■□□□□ 0.07
CHRNA3P32297 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC15.49■□□□□ 0.07
CHRNA3P32297 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC15.49■□□□□ 0.07
CHRNA3P32297 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CHRNA3P32297 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
CHRNA3P32297 APP-205ENST00000358918 2366 ntTSL 5 BASIC15.49■□□□□ 0.07
CHRNA3P32297 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CHRNA3P32297 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHRNA3P32297 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHRNA3P32297 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHRNA3P32297 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC15.49■□□□□ 0.07
CHRNA3P32297 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHRNA3P32297 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CHRNA3P32297 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHRNA3P32297 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHRNA3P32297 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CHRNA3P32297 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC15.49■□□□□ 0.07
CHRNA3P32297 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHRNA3P32297 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC15.48■□□□□ 0.07
CHRNA3P32297 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CHRNA3P32297 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CHRNA3P32297 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC15.48■□□□□ 0.07
CHRNA3P32297 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms