Protein–RNA interactions for Protein: P20749

BCL3, B-cell lymphoma 3 protein, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCL3P20749 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
BCL3P20749 AL359881.3-201ENST00000602640 1721 ntBASIC12.49□□□□□ -0.41
BCL3P20749 TP73-213ENST00000604479 1623 ntTSL 5 BASIC12.49□□□□□ -0.41
BCL3P20749 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
BCL3P20749 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
BCL3P20749 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
BCL3P20749 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
BCL3P20749 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC12.49□□□□□ -0.41
BCL3P20749 ZBTB12BP-201ENST00000314232 1122 ntBASIC12.49□□□□□ -0.41
BCL3P20749 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC12.49□□□□□ -0.41
BCL3P20749 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
BCL3P20749 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC12.49□□□□□ -0.41
BCL3P20749 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
BCL3P20749 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
BCL3P20749 C2orf27AP3-201ENST00000434123 579 ntBASIC12.49□□□□□ -0.41
BCL3P20749 PUDPP3-201ENST00000445368 636 ntBASIC12.49□□□□□ -0.41
BCL3P20749 BCRP2-202ENST00000447763 634 ntBASIC12.49□□□□□ -0.41
BCL3P20749 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
BCL3P20749 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC12.49□□□□□ -0.41
BCL3P20749 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC12.49□□□□□ -0.41
BCL3P20749 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC12.49□□□□□ -0.41
BCL3P20749 BCRP6-201ENST00000510112 632 ntBASIC12.49□□□□□ -0.41
BCL3P20749 BCRP7-201ENST00000511549 544 ntBASIC12.49□□□□□ -0.41
BCL3P20749 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
BCL3P20749 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC12.49□□□□□ -0.41
BCL3P20749 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC12.49□□□□□ -0.41
BCL3P20749 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
BCL3P20749 SLC25A47P1-201ENST00000531577 414 ntBASIC12.49□□□□□ -0.41
BCL3P20749 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC12.49□□□□□ -0.41
BCL3P20749 AC027307.3-201ENST00000594262 1100 ntBASIC12.49□□□□□ -0.41
BCL3P20749 AL354718.3-201ENST00000616414 581 ntBASIC12.49□□□□□ -0.41
BCL3P20749 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC12.49□□□□□ -0.41
BCL3P20749 AC132938.4-201ENST00000623835 848 ntBASIC12.49□□□□□ -0.41
BCL3P20749 CR382287.1-201ENST00000623954 586 ntBASIC12.49□□□□□ -0.41
BCL3P20749 AC025048.6-201ENST00000634326 1161 ntBASIC12.49□□□□□ -0.41
BCL3P20749 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
BCL3P20749 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC12.49□□□□□ -0.41
BCL3P20749 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
BCL3P20749 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
BCL3P20749 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
BCL3P20749 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
BCL3P20749 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
BCL3P20749 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
BCL3P20749 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
BCL3P20749 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC12.49□□□□□ -0.41
BCL3P20749 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC12.49□□□□□ -0.41
BCL3P20749 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
BCL3P20749 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC12.49□□□□□ -0.41
BCL3P20749 R3HDM2P2-201ENST00000401880 2116 ntBASIC12.49□□□□□ -0.41
BCL3P20749 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
BCL3P20749 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
BCL3P20749 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC12.49□□□□□ -0.41
BCL3P20749 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC12.49□□□□□ -0.41
BCL3P20749 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
BCL3P20749 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC12.48□□□□□ -0.41
BCL3P20749 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
BCL3P20749 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
BCL3P20749 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC12.48□□□□□ -0.41
BCL3P20749 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
BCL3P20749 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
BCL3P20749 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
BCL3P20749 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
BCL3P20749 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
BCL3P20749 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
BCL3P20749 AL590440.2-201ENST00000641973 1595 ntBASIC12.48□□□□□ -0.41
BCL3P20749 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
BCL3P20749 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
BCL3P20749 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
BCL3P20749 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
BCL3P20749 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC12.48□□□□□ -0.41
BCL3P20749 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
BCL3P20749 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
BCL3P20749 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
BCL3P20749 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
BCL3P20749 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC12.48□□□□□ -0.41
BCL3P20749 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
BCL3P20749 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
BCL3P20749 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC12.48□□□□□ -0.41
BCL3P20749 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
BCL3P20749 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
BCL3P20749 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
BCL3P20749 AC005229.1-201ENST00000392885 409 ntBASIC12.48□□□□□ -0.41
BCL3P20749 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC12.48□□□□□ -0.41
BCL3P20749 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC12.48□□□□□ -0.41
BCL3P20749 PTPA-220ENST00000436883 532 ntTSL 4 BASIC12.48□□□□□ -0.41
BCL3P20749 HMGN1P19-201ENST00000436976 333 ntBASIC12.48□□□□□ -0.41
BCL3P20749 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
BCL3P20749 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC12.48□□□□□ -0.41
BCL3P20749 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
BCL3P20749 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC12.48□□□□□ -0.41
BCL3P20749 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
BCL3P20749 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC12.48□□□□□ -0.41
BCL3P20749 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC12.48□□□□□ -0.41
BCL3P20749 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
BCL3P20749 COQ6-210ENST00000554920 649 ntTSL 3 BASIC12.48□□□□□ -0.41
BCL3P20749 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
BCL3P20749 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC12.48□□□□□ -0.41
BCL3P20749 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC12.48□□□□□ -0.41
BCL3P20749 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC12.48□□□□□ -0.41
BCL3P20749 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms