Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
KRT4P19013 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
KRT4P19013 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
KRT4P19013 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
KRT4P19013 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
KRT4P19013 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
KRT4P19013 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
KRT4P19013 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
KRT4P19013 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.05
KRT4P19013 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
KRT4P19013 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
KRT4P19013 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC14.77□□□□□ -0.05
KRT4P19013 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
KRT4P19013 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
KRT4P19013 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC14.76□□□□□ -0.05
KRT4P19013 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
KRT4P19013 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
KRT4P19013 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
KRT4P19013 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC14.76□□□□□ -0.05
KRT4P19013 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
KRT4P19013 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
KRT4P19013 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
KRT4P19013 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
KRT4P19013 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC14.76□□□□□ -0.05
KRT4P19013 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
KRT4P19013 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
KRT4P19013 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
KRT4P19013 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
KRT4P19013 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
KRT4P19013 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
KRT4P19013 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
KRT4P19013 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
KRT4P19013 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
KRT4P19013 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
KRT4P19013 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
KRT4P19013 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.76□□□□□ -0.05
KRT4P19013 TSSK5P-201ENST00000423978 907 ntBASIC14.76□□□□□ -0.05
KRT4P19013 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.76□□□□□ -0.05
KRT4P19013 EIF3FP3-201ENST00000434851 1086 ntBASIC14.76□□□□□ -0.05
KRT4P19013 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.76□□□□□ -0.05
KRT4P19013 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC14.76□□□□□ -0.05
KRT4P19013 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
KRT4P19013 AC114812.1-204ENST00000449669 728 ntBASIC14.76□□□□□ -0.05
KRT4P19013 GIMAP3P-201ENST00000495150 836 ntBASIC14.76□□□□□ -0.05
KRT4P19013 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.76□□□□□ -0.05
KRT4P19013 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.76□□□□□ -0.05
KRT4P19013 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
KRT4P19013 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
KRT4P19013 AC025678.2-201ENST00000562061 970 ntBASIC14.76□□□□□ -0.05
KRT4P19013 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
KRT4P19013 AC015911.4-201ENST00000588022 1070 ntBASIC14.76□□□□□ -0.05
KRT4P19013 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC14.76□□□□□ -0.05
KRT4P19013 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.76□□□□□ -0.05
KRT4P19013 AC007431.3-201ENST00000623221 587 ntBASIC14.76□□□□□ -0.05
KRT4P19013 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
KRT4P19013 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
KRT4P19013 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
KRT4P19013 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
KRT4P19013 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
KRT4P19013 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
KRT4P19013 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC14.76□□□□□ -0.05
KRT4P19013 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
KRT4P19013 AC004241.5-201ENST00000623870 2448 ntBASIC14.76□□□□□ -0.05
KRT4P19013 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
KRT4P19013 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
KRT4P19013 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
KRT4P19013 DMBT1P1-203ENST00000636837 4628 ntBASIC14.76□□□□□ -0.05
KRT4P19013 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
KRT4P19013 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
KRT4P19013 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
KRT4P19013 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC14.76□□□□□ -0.05
KRT4P19013 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC14.76□□□□□ -0.05
KRT4P19013 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC14.76□□□□□ -0.05
KRT4P19013 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
KRT4P19013 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC14.76□□□□□ -0.05
KRT4P19013 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
KRT4P19013 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
KRT4P19013 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.75□□□□□ -0.05
KRT4P19013 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
KRT4P19013 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
KRT4P19013 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
KRT4P19013 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
KRT4P19013 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
KRT4P19013 AC114271.1-201ENST00000612689 2813 ntBASIC14.75□□□□□ -0.05
KRT4P19013 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
KRT4P19013 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
KRT4P19013 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC14.75□□□□□ -0.05
KRT4P19013 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
KRT4P19013 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
KRT4P19013 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC14.75□□□□□ -0.05
KRT4P19013 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.75□□□□□ -0.05
KRT4P19013 INVS-201ENST00000262456 2968 ntTSL 5 BASIC14.75□□□□□ -0.05
KRT4P19013 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
KRT4P19013 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
KRT4P19013 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.75□□□□□ -0.05
KRT4P19013 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
KRT4P19013 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
KRT4P19013 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.75□□□□□ -0.05
KRT4P19013 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.75□□□□□ -0.05
KRT4P19013 TREML5P-201ENST00000421694 576 ntBASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms