Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ATF1P18846 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
ATF1P18846 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC12.92□□□□□ -0.34
ATF1P18846 PNMT-202ENST00000394246 821 ntTSL 2 BASIC12.92□□□□□ -0.34
ATF1P18846 METTL26-204ENST00000397665 558 ntTSL 2 BASIC12.92□□□□□ -0.34
ATF1P18846 C1QBPP1-201ENST00000400117 770 ntBASIC12.92□□□□□ -0.34
ATF1P18846 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ATF1P18846 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ATF1P18846 GNAQP1-201ENST00000444815 1067 ntBASIC12.92□□□□□ -0.34
ATF1P18846 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC12.92□□□□□ -0.34
ATF1P18846 AC114812.1-204ENST00000449669 728 ntBASIC12.92□□□□□ -0.34
ATF1P18846 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC12.92□□□□□ -0.34
ATF1P18846 CD81-207ENST00000481687 890 ntTSL 2 BASIC12.92□□□□□ -0.34
ATF1P18846 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC12.92□□□□□ -0.34
ATF1P18846 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
ATF1P18846 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ATF1P18846 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ATF1P18846 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC12.92□□□□□ -0.34
ATF1P18846 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC12.92□□□□□ -0.34
ATF1P18846 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC12.92□□□□□ -0.34
ATF1P18846 RPS15-205ENST00000586686 562 ntTSL 5 BASIC12.92□□□□□ -0.34
ATF1P18846 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC12.92□□□□□ -0.34
ATF1P18846 RPS15-208ENST00000591804 711 ntTSL 5 BASIC12.92□□□□□ -0.34
ATF1P18846 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
ATF1P18846 AC092364.2-202ENST00000597012 1073 ntBASIC12.92□□□□□ -0.34
ATF1P18846 AL365181.3-201ENST00000605886 3222 ntBASIC12.92□□□□□ -0.34
ATF1P18846 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC12.92□□□□□ -0.34
ATF1P18846 AC139530.3-201ENST00000620344 690 ntBASIC12.92□□□□□ -0.34
ATF1P18846 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
ATF1P18846 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ATF1P18846 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
ATF1P18846 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
ATF1P18846 AL157996.1-201ENST00000624684 2299 ntBASIC12.92□□□□□ -0.34
ATF1P18846 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
ATF1P18846 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC12.92□□□□□ -0.34
ATF1P18846 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ATF1P18846 AMT-232ENST00000636199 1546 ntTSL 5 BASIC12.92□□□□□ -0.34
ATF1P18846 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
ATF1P18846 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ATF1P18846 MIR497HG-202ENST00000572453 3838 ntBASIC12.92□□□□□ -0.34
ATF1P18846 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
ATF1P18846 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
ATF1P18846 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
ATF1P18846 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ATF1P18846 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ATF1P18846 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC12.91□□□□□ -0.34
ATF1P18846 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC12.91□□□□□ -0.34
ATF1P18846 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
ATF1P18846 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
ATF1P18846 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
ATF1P18846 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
ATF1P18846 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ATF1P18846 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC12.91□□□□□ -0.34
ATF1P18846 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ATF1P18846 DKFZP434A062-201ENST00000573103 5021 ntBASIC12.91□□□□□ -0.34
ATF1P18846 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ATF1P18846 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
ATF1P18846 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
ATF1P18846 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC12.91□□□□□ -0.34
ATF1P18846 FOS-202ENST00000535987 1402 ntTSL 2 BASIC12.91□□□□□ -0.34
ATF1P18846 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ATF1P18846 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC12.91□□□□□ -0.34
ATF1P18846 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
ATF1P18846 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ATF1P18846 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC12.91□□□□□ -0.34
ATF1P18846 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ATF1P18846 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC12.91□□□□□ -0.34
ATF1P18846 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
ATF1P18846 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ATF1P18846 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC12.91□□□□□ -0.34
ATF1P18846 AC093004.1-201ENST00000508850 424 ntBASIC12.91□□□□□ -0.34
ATF1P18846 AC093214.1-201ENST00000511688 1107 ntBASIC12.91□□□□□ -0.34
ATF1P18846 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC12.91□□□□□ -0.34
ATF1P18846 FADS2-205ENST00000517839 469 ntTSL 3 BASIC12.91□□□□□ -0.34
ATF1P18846 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC12.91□□□□□ -0.34
ATF1P18846 AC055876.2-201ENST00000531834 546 ntBASIC12.91□□□□□ -0.34
ATF1P18846 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ATF1P18846 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ATF1P18846 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC12.91□□□□□ -0.34
ATF1P18846 MIR6074-201ENST00000612054 107 ntBASIC12.91□□□□□ -0.34
ATF1P18846 AC106028.4-201ENST00000614509 607 ntBASIC12.91□□□□□ -0.34
ATF1P18846 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ATF1P18846 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC12.91□□□□□ -0.34
ATF1P18846 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC12.91□□□□□ -0.34
ATF1P18846 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC12.91□□□□□ -0.34
ATF1P18846 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ATF1P18846 AL603764.1-201ENST00000636452 321 ntBASIC12.91□□□□□ -0.34
ATF1P18846 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC12.91□□□□□ -0.34
ATF1P18846 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ATF1P18846 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ATF1P18846 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
ATF1P18846 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ATF1P18846 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
ATF1P18846 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
ATF1P18846 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC12.91□□□□□ -0.34
ATF1P18846 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
ATF1P18846 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ATF1P18846 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
ATF1P18846 TSN-212ENST00000536142 3328 ntTSL 2 BASIC12.91□□□□□ -0.34
ATF1P18846 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms