Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
VCLP18206 MPV17-206ENST00000402722 827 ntTSL 3 BASIC14.83□□□□□ -0.04
VCLP18206 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC14.83□□□□□ -0.04
VCLP18206 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC14.83□□□□□ -0.04
VCLP18206 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC14.83□□□□□ -0.04
VCLP18206 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC14.83□□□□□ -0.04
VCLP18206 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC14.83□□□□□ -0.04
VCLP18206 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC14.83□□□□□ -0.04
VCLP18206 AC078819.1-201ENST00000547454 765 ntBASIC14.83□□□□□ -0.04
VCLP18206 AC012085.1-201ENST00000548270 765 ntBASIC14.83□□□□□ -0.04
VCLP18206 NAA38-206ENST00000576384 424 ntTSL 2 BASIC14.83□□□□□ -0.04
VCLP18206 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC14.83□□□□□ -0.04
VCLP18206 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
VCLP18206 ECM1P1-201ENST00000604092 1279 ntBASIC14.83□□□□□ -0.04
VCLP18206 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
VCLP18206 WNT11-204ENST00000621122 789 ntTSL 5 BASIC14.83□□□□□ -0.04
VCLP18206 AC008687.7-202ENST00000637404 953 ntBASIC14.83□□□□□ -0.04
VCLP18206 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC14.83□□□□□ -0.04
VCLP18206 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VCLP18206 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
VCLP18206 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
VCLP18206 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC14.83□□□□□ -0.04
VCLP18206 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VCLP18206 MTHFR-210ENST00000641407 2387 ntBASIC14.83□□□□□ -0.04
VCLP18206 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VCLP18206 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
VCLP18206 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VCLP18206 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14.83□□□□□ -0.04
VCLP18206 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC14.83□□□□□ -0.04
VCLP18206 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
VCLP18206 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VCLP18206 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
VCLP18206 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VCLP18206 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
VCLP18206 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VCLP18206 ANKRD30BP2-201ENST00000435744 1610 ntBASIC14.82□□□□□ -0.04
VCLP18206 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VCLP18206 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VCLP18206 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
VCLP18206 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
VCLP18206 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC14.82□□□□□ -0.04
VCLP18206 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VCLP18206 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
VCLP18206 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VCLP18206 ANKRD19P-201ENST00000338192 862 ntBASIC14.82□□□□□ -0.04
VCLP18206 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
VCLP18206 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC14.82□□□□□ -0.04
VCLP18206 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC14.82□□□□□ -0.04
VCLP18206 HLA-V-201ENST00000429037 534 ntBASIC14.82□□□□□ -0.04
VCLP18206 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
VCLP18206 CSF2RBP1-201ENST00000447905 391 ntBASIC14.82□□□□□ -0.04
VCLP18206 AL590640.2-201ENST00000457038 527 ntBASIC14.82□□□□□ -0.04
VCLP18206 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC14.82□□□□□ -0.04
VCLP18206 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC14.82□□□□□ -0.04
VCLP18206 Six3os1_5.1-201ENST00000611000 271 ntBASIC14.82□□□□□ -0.04
VCLP18206 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC14.82□□□□□ -0.04
VCLP18206 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
VCLP18206 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VCLP18206 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VCLP18206 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VCLP18206 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
VCLP18206 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
VCLP18206 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VCLP18206 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VCLP18206 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
VCLP18206 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VCLP18206 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
VCLP18206 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC14.81□□□□□ -0.04
VCLP18206 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
VCLP18206 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
VCLP18206 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
VCLP18206 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
VCLP18206 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
VCLP18206 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
VCLP18206 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VCLP18206 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
VCLP18206 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
VCLP18206 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VCLP18206 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VCLP18206 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC14.81□□□□□ -0.04
VCLP18206 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VCLP18206 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VCLP18206 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VCLP18206 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
VCLP18206 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC14.81□□□□□ -0.04
VCLP18206 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC14.81□□□□□ -0.04
VCLP18206 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.81□□□□□ -0.04
VCLP18206 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC14.81□□□□□ -0.04
VCLP18206 FAM8A4P-201ENST00000435433 1213 ntBASIC14.81□□□□□ -0.04
VCLP18206 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC14.81□□□□□ -0.04
VCLP18206 FTLP10-202ENST00000505798 471 ntBASIC14.81□□□□□ -0.04
VCLP18206 AC026434.2-201ENST00000506094 1078 ntBASIC14.81□□□□□ -0.04
VCLP18206 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC14.81□□□□□ -0.04
VCLP18206 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VCLP18206 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC14.81□□□□□ -0.04
VCLP18206 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC14.81□□□□□ -0.04
VCLP18206 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
VCLP18206 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
VCLP18206 AC113367.3-201ENST00000508316 1912 ntBASIC14.81□□□□□ -0.04
VCLP18206 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms