Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCL4P13236 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCL4P13236 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.7□□□□□ -0.22
CCL4P13236 AJ011931.1-201ENST00000618749 2492 ntBASIC13.7□□□□□ -0.22
CCL4P13236 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCL4P13236 NID2-208ENST00000617139 3827 ntTSL 5 BASIC13.7□□□□□ -0.22
CCL4P13236 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCL4P13236 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CCL4P13236 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCL4P13236 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCL4P13236 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CCL4P13236 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CCL4P13236 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCL4P13236 API5-208ENST00000531273 1868 ntTSL 2 BASIC13.7□□□□□ -0.22
CCL4P13236 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CCL4P13236 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCL4P13236 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC13.69□□□□□ -0.22
CCL4P13236 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC13.69□□□□□ -0.22
CCL4P13236 IL9RP3-201ENST00000442856 1674 ntBASIC13.69□□□□□ -0.22
CCL4P13236 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCL4P13236 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC13.69□□□□□ -0.22
CCL4P13236 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCL4P13236 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.69□□□□□ -0.22
CCL4P13236 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CCL4P13236 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
CCL4P13236 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCL4P13236 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCL4P13236 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC13.69□□□□□ -0.22
CCL4P13236 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CCL4P13236 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC13.69□□□□□ -0.22
CCL4P13236 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCL4P13236 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCL4P13236 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.69□□□□□ -0.22
CCL4P13236 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCL4P13236 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCL4P13236 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCL4P13236 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CCL4P13236 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC13.69□□□□□ -0.22
CCL4P13236 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CCL4P13236 AL354861.1-201ENST00000445213 355 ntBASIC13.69□□□□□ -0.22
CCL4P13236 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC13.69□□□□□ -0.22
CCL4P13236 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
CCL4P13236 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CCL4P13236 AC138701.2-201ENST00000553634 226 ntBASIC13.69□□□□□ -0.22
CCL4P13236 HERC2P11-201ENST00000562845 725 ntBASIC13.69□□□□□ -0.22
CCL4P13236 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC13.69□□□□□ -0.22
CCL4P13236 AC100756.2-201ENST00000569537 736 ntBASIC13.69□□□□□ -0.22
CCL4P13236 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC13.69□□□□□ -0.22
CCL4P13236 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC13.69□□□□□ -0.22
CCL4P13236 RN7SL470P-201ENST00000583069 259 ntBASIC13.69□□□□□ -0.22
CCL4P13236 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC13.69□□□□□ -0.22
CCL4P13236 AC005041.3-201ENST00000606287 649 ntBASIC13.69□□□□□ -0.22
CCL4P13236 AC021016.3-201ENST00000608367 477 ntBASIC13.69□□□□□ -0.22
CCL4P13236 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CCL4P13236 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC13.69□□□□□ -0.22
CCL4P13236 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCL4P13236 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CCL4P13236 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC13.69□□□□□ -0.22
CCL4P13236 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCL4P13236 MECR-202ENST00000373791 2416 ntTSL 2 BASIC13.69□□□□□ -0.22
CCL4P13236 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CCL4P13236 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
CCL4P13236 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL4P13236 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
CCL4P13236 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.68□□□□□ -0.22
CCL4P13236 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC13.68□□□□□ -0.22
CCL4P13236 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL4P13236 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CCL4P13236 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
CCL4P13236 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL4P13236 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL4P13236 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL4P13236 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.68□□□□□ -0.22
CCL4P13236 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL4P13236 AC022532.1-201ENST00000624563 1728 ntBASIC13.68□□□□□ -0.22
CCL4P13236 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL4P13236 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CCL4P13236 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL4P13236 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL4P13236 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL4P13236 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL4P13236 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CCL4P13236 AC097065.1-201ENST00000425737 517 ntBASIC13.68□□□□□ -0.22
CCL4P13236 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC13.68□□□□□ -0.22
CCL4P13236 AC004837.1-201ENST00000446267 564 ntBASIC13.68□□□□□ -0.22
CCL4P13236 LYPLA2P1-203ENST00000447689 696 ntBASIC13.68□□□□□ -0.22
CCL4P13236 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC13.68□□□□□ -0.22
CCL4P13236 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC13.68□□□□□ -0.22
CCL4P13236 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC13.68□□□□□ -0.22
CCL4P13236 RPL18AP8-201ENST00000486071 528 ntBASIC13.68□□□□□ -0.22
CCL4P13236 AP000911.2-201ENST00000534330 502 ntBASIC13.68□□□□□ -0.22
CCL4P13236 NEU3-207ENST00000534628 746 ntTSL 2 BASIC13.68□□□□□ -0.22
CCL4P13236 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC13.68□□□□□ -0.22
CCL4P13236 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC13.68□□□□□ -0.22
CCL4P13236 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC13.68□□□□□ -0.22
CCL4P13236 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC13.68□□□□□ -0.22
CCL4P13236 AC105137.3-201ENST00000617588 984 ntBASIC13.68□□□□□ -0.22
CCL4P13236 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC13.68□□□□□ -0.22
CCL4P13236 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL4P13236 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms