Protein–RNA interactions for Protein: P11279

LAMP1, Lysosome-associated membrane glycoprotein 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1P11279 RN7SL752P-201ENST00000463779 287 ntBASIC13.9□□□□□ -0.18
LAMP1P11279 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
LAMP1P11279 AC011495.1-201ENST00000498085 584 ntBASIC13.9□□□□□ -0.18
LAMP1P11279 SLC25A47P1-201ENST00000531577 414 ntBASIC13.9□□□□□ -0.18
LAMP1P11279 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
LAMP1P11279 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
LAMP1P11279 COX11-202ENST00000571584 1108 ntTSL 2 BASIC13.9□□□□□ -0.18
LAMP1P11279 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC13.9□□□□□ -0.18
LAMP1P11279 PIGL-212ENST00000581006 554 ntTSL 4 BASIC13.9□□□□□ -0.18
LAMP1P11279 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC13.9□□□□□ -0.18
LAMP1P11279 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC13.9□□□□□ -0.18
LAMP1P11279 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LAMP1P11279 OR10B1P-201ENST00000601666 907 ntBASIC13.9□□□□□ -0.18
LAMP1P11279 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LAMP1P11279 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LAMP1P11279 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LAMP1P11279 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.9□□□□□ -0.18
LAMP1P11279 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LAMP1P11279 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
LAMP1P11279 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LAMP1P11279 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LAMP1P11279 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
LAMP1P11279 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC13.9□□□□□ -0.18
LAMP1P11279 AC130686.1-201ENST00000622936 2466 ntBASIC13.9□□□□□ -0.18
LAMP1P11279 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC13.9□□□□□ -0.18
LAMP1P11279 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC13.9□□□□□ -0.18
LAMP1P11279 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LAMP1P11279 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
LAMP1P11279 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC13.9□□□□□ -0.18
LAMP1P11279 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LAMP1P11279 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LAMP1P11279 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LAMP1P11279 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
LAMP1P11279 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
LAMP1P11279 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LAMP1P11279 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
LAMP1P11279 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
LAMP1P11279 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.19
LAMP1P11279 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.19
LAMP1P11279 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
LAMP1P11279 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
LAMP1P11279 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
LAMP1P11279 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LAMP1P11279 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LAMP1P11279 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LAMP1P11279 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.89□□□□□ -0.19
LAMP1P11279 MAPT-IT1-201ENST00000624111 3016 ntBASIC13.89□□□□□ -0.19
LAMP1P11279 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC13.89□□□□□ -0.19
LAMP1P11279 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
LAMP1P11279 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC13.89□□□□□ -0.19
LAMP1P11279 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
LAMP1P11279 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LAMP1P11279 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
LAMP1P11279 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LAMP1P11279 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
LAMP1P11279 KRT8P28-201ENST00000433288 1390 ntBASIC13.89□□□□□ -0.19
LAMP1P11279 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
LAMP1P11279 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
LAMP1P11279 ZBTB12BP-201ENST00000314232 1122 ntBASIC13.89□□□□□ -0.19
LAMP1P11279 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
LAMP1P11279 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
LAMP1P11279 AC092933.1-201ENST00000393644 945 ntBASIC13.89□□□□□ -0.19
LAMP1P11279 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LAMP1P11279 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC13.89□□□□□ -0.19
LAMP1P11279 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
LAMP1P11279 BCRP2-202ENST00000447763 634 ntBASIC13.89□□□□□ -0.19
LAMP1P11279 AC007389.4-201ENST00000454674 793 ntBASIC13.89□□□□□ -0.19
LAMP1P11279 TMEM198B-204ENST00000484016 896 ntBASIC13.89□□□□□ -0.19
LAMP1P11279 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LAMP1P11279 BCRP6-201ENST00000510112 632 ntBASIC13.89□□□□□ -0.19
LAMP1P11279 BCRP7-201ENST00000511549 544 ntBASIC13.89□□□□□ -0.19
LAMP1P11279 RNA5SP486-201ENST00000515961 83 ntBASIC13.89□□□□□ -0.19
LAMP1P11279 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC13.89□□□□□ -0.19
LAMP1P11279 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
LAMP1P11279 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC13.89□□□□□ -0.19
LAMP1P11279 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC13.89□□□□□ -0.19
LAMP1P11279 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
LAMP1P11279 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LAMP1P11279 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
LAMP1P11279 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
LAMP1P11279 GREM1-201ENST00000560677 623 ntTSL 4 BASIC13.89□□□□□ -0.19
LAMP1P11279 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC13.89□□□□□ -0.19
LAMP1P11279 MIR4683-201ENST00000579659 81 ntBASIC13.89□□□□□ -0.19
LAMP1P11279 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC13.89□□□□□ -0.19
LAMP1P11279 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC13.89□□□□□ -0.19
LAMP1P11279 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC13.89□□□□□ -0.19
LAMP1P11279 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
LAMP1P11279 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC13.89□□□□□ -0.19
LAMP1P11279 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
LAMP1P11279 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LAMP1P11279 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
LAMP1P11279 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
LAMP1P11279 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LAMP1P11279 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC13.89□□□□□ -0.19
LAMP1P11279 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LAMP1P11279 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LAMP1P11279 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LAMP1P11279 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LAMP1P11279 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LAMP1P11279 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms