Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLTAP09496 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
CLTAP09496 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
CLTAP09496 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC16.07■□□□□ 0.16
CLTAP09496 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLTAP09496 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLTAP09496 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC16.07■□□□□ 0.16
CLTAP09496 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLTAP09496 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLTAP09496 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLTAP09496 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
CLTAP09496 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC16.07■□□□□ 0.16
CLTAP09496 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC16.07■□□□□ 0.16
CLTAP09496 PTPA-218ENST00000435132 618 ntTSL 2 BASIC16.07■□□□□ 0.16
CLTAP09496 AC006033.1-201ENST00000440505 426 ntBASIC16.07■□□□□ 0.16
CLTAP09496 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC16.07■□□□□ 0.16
CLTAP09496 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC16.07■□□□□ 0.16
CLTAP09496 AL035414.1-201ENST00000451327 857 ntBASIC16.07■□□□□ 0.16
CLTAP09496 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLTAP09496 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLTAP09496 HNRNPA1P36-201ENST00000521313 955 ntBASIC16.07■□□□□ 0.16
CLTAP09496 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
CLTAP09496 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLTAP09496 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
CLTAP09496 EMC4-209ENST00000559421 497 ntTSL 2 BASIC16.07■□□□□ 0.16
CLTAP09496 AC100827.2-201ENST00000563214 1194 ntBASIC16.07■□□□□ 0.16
CLTAP09496 AC005730.2-201ENST00000564549 1184 ntBASIC16.07■□□□□ 0.16
CLTAP09496 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC16.07■□□□□ 0.16
CLTAP09496 MIR4525-201ENST00000580000 75 ntBASIC16.07■□□□□ 0.16
CLTAP09496 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CLTAP09496 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC16.07■□□□□ 0.16
CLTAP09496 AC007663.3-201ENST00000609632 465 ntBASIC16.07■□□□□ 0.16
CLTAP09496 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC16.07■□□□□ 0.16
CLTAP09496 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC16.07■□□□□ 0.16
CLTAP09496 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLTAP09496 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CLTAP09496 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLTAP09496 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CLTAP09496 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC16.07■□□□□ 0.16
CLTAP09496 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLTAP09496 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLTAP09496 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLTAP09496 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC16.07■□□□□ 0.16
CLTAP09496 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC16.07■□□□□ 0.16
CLTAP09496 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLTAP09496 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
CLTAP09496 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CLTAP09496 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLTAP09496 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLTAP09496 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CLTAP09496 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLTAP09496 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC16.06■□□□□ 0.16
CLTAP09496 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLTAP09496 AC140479.7-201ENST00000636301 2332 ntBASIC16.06■□□□□ 0.16
CLTAP09496 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLTAP09496 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
CLTAP09496 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CLTAP09496 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CLTAP09496 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CLTAP09496 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CLTAP09496 AC018735.1-201ENST00000437208 1502 ntBASIC16.06■□□□□ 0.16
CLTAP09496 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CLTAP09496 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CLTAP09496 HARS-202ENST00000415192 1401 ntTSL 2 BASIC16.06■□□□□ 0.16
CLTAP09496 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CLTAP09496 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLTAP09496 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLTAP09496 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CLTAP09496 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CLTAP09496 SMS-201ENST00000379404 1174 ntTSL 3 BASIC16.06■□□□□ 0.16
CLTAP09496 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC16.06■□□□□ 0.16
CLTAP09496 SKA2-202ENST00000437036 625 ntTSL 2 BASIC16.06■□□□□ 0.16
CLTAP09496 FAM58BP-201ENST00000439056 645 ntBASIC16.06■□□□□ 0.16
CLTAP09496 AC004898.1-201ENST00000451057 766 ntBASIC16.06■□□□□ 0.16
CLTAP09496 CICP12-201ENST00000455801 843 ntBASIC16.06■□□□□ 0.16
CLTAP09496 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC16.06■□□□□ 0.16
CLTAP09496 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC16.06■□□□□ 0.16
CLTAP09496 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC16.06■□□□□ 0.16
CLTAP09496 AC132192.2-201ENST00000596206 1147 ntBASIC16.06■□□□□ 0.16
CLTAP09496 AL023803.2-201ENST00000620080 638 ntBASIC16.06■□□□□ 0.16
CLTAP09496 MVK-217ENST00000639206 367 ntTSL 5 BASIC16.06■□□□□ 0.16
CLTAP09496 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC16.06■□□□□ 0.16
CLTAP09496 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLTAP09496 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLTAP09496 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLTAP09496 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLTAP09496 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLTAP09496 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC16.06■□□□□ 0.16
CLTAP09496 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLTAP09496 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLTAP09496 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC16.06■□□□□ 0.16
CLTAP09496 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CLTAP09496 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLTAP09496 MX1-218ENST00000619682 1980 ntTSL 5 BASIC16.06■□□□□ 0.16
CLTAP09496 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLTAP09496 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLTAP09496 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLTAP09496 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CLTAP09496 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLTAP09496 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms