Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 AC152010.1-201ENST00000415779 2006 ntBASIC14.78□□□□□ -0.04
GPC4O75487 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC14.78□□□□□ -0.04
GPC4O75487 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
GPC4O75487 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GPC4O75487 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.78□□□□□ -0.04
GPC4O75487 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC14.78□□□□□ -0.04
GPC4O75487 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.78□□□□□ -0.04
GPC4O75487 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GPC4O75487 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
GPC4O75487 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
GPC4O75487 FOS-202ENST00000535987 1402 ntTSL 2 BASIC14.78□□□□□ -0.04
GPC4O75487 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
GPC4O75487 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
GPC4O75487 AC018665.1-201ENST00000622927 1362 ntBASIC14.78□□□□□ -0.04
GPC4O75487 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC14.78□□□□□ -0.04
GPC4O75487 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.78□□□□□ -0.04
GPC4O75487 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
GPC4O75487 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GPC4O75487 POM121L8P-201ENST00000417732 1281 ntBASIC14.78□□□□□ -0.04
GPC4O75487 POM121L9P-203ENST00000441984 1285 ntBASIC14.78□□□□□ -0.04
GPC4O75487 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC14.78□□□□□ -0.04
GPC4O75487 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
GPC4O75487 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
GPC4O75487 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GPC4O75487 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC14.78□□□□□ -0.04
GPC4O75487 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GPC4O75487 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC14.78□□□□□ -0.04
GPC4O75487 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC14.78□□□□□ -0.04
GPC4O75487 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
GPC4O75487 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GPC4O75487 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
GPC4O75487 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
GPC4O75487 AL731571.1-201ENST00000617058 5428 ntBASIC14.78□□□□□ -0.04
GPC4O75487 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
GPC4O75487 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
GPC4O75487 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
GPC4O75487 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GPC4O75487 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC14.78□□□□□ -0.04
GPC4O75487 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.78□□□□□ -0.04
GPC4O75487 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
GPC4O75487 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
GPC4O75487 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GPC4O75487 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GPC4O75487 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC14.78□□□□□ -0.04
GPC4O75487 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.78□□□□□ -0.04
GPC4O75487 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
GPC4O75487 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GPC4O75487 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GPC4O75487 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
GPC4O75487 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
GPC4O75487 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
GPC4O75487 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
GPC4O75487 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC14.77□□□□□ -0.04
GPC4O75487 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
GPC4O75487 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
GPC4O75487 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC14.77□□□□□ -0.04
GPC4O75487 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.77□□□□□ -0.04
GPC4O75487 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
GPC4O75487 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
GPC4O75487 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
GPC4O75487 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.77□□□□□ -0.04
GPC4O75487 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
GPC4O75487 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC14.77□□□□□ -0.05
GPC4O75487 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC14.77□□□□□ -0.05
GPC4O75487 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC14.77□□□□□ -0.05
GPC4O75487 AC245100.3-201ENST00000441281 285 ntBASIC14.77□□□□□ -0.05
GPC4O75487 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC14.77□□□□□ -0.05
GPC4O75487 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
GPC4O75487 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
GPC4O75487 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC14.77□□□□□ -0.05
GPC4O75487 RBM7-207ENST00000544582 692 ntTSL 3 BASIC14.77□□□□□ -0.05
GPC4O75487 AC106886.1-201ENST00000568660 600 ntBASIC14.77□□□□□ -0.05
GPC4O75487 APOC4-201ENST00000591600 348 ntTSL 3 BASIC14.77□□□□□ -0.05
GPC4O75487 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
GPC4O75487 ENPP7P14-201ENST00000621765 1040 ntBASIC14.77□□□□□ -0.05
GPC4O75487 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC14.77□□□□□ -0.05
GPC4O75487 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
GPC4O75487 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
GPC4O75487 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
GPC4O75487 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
GPC4O75487 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.77□□□□□ -0.05
GPC4O75487 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
GPC4O75487 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.05
GPC4O75487 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
GPC4O75487 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
GPC4O75487 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
GPC4O75487 AL137784.3-201ENST00000623858 2288 ntBASIC14.77□□□□□ -0.05
GPC4O75487 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.05
GPC4O75487 MIR193BHG-211ENST00000641433 5365 ntBASIC14.77□□□□□ -0.05
GPC4O75487 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
GPC4O75487 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
GPC4O75487 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
GPC4O75487 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
GPC4O75487 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
GPC4O75487 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
GPC4O75487 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
GPC4O75487 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
GPC4O75487 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
GPC4O75487 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
GPC4O75487 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms