Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
PDLIM1O00151 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PDLIM1O00151 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PDLIM1O00151 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC14.06□□□□□ -0.16
PDLIM1O00151 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PDLIM1O00151 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PDLIM1O00151 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PDLIM1O00151 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
PDLIM1O00151 AL133267.1-201ENST00000398220 340 ntBASIC14.06□□□□□ -0.16
PDLIM1O00151 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14.06□□□□□ -0.16
PDLIM1O00151 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.06□□□□□ -0.16
PDLIM1O00151 UGT1A2P-201ENST00000454886 866 ntBASIC14.06□□□□□ -0.16
PDLIM1O00151 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PDLIM1O00151 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
PDLIM1O00151 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.06□□□□□ -0.16
PDLIM1O00151 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
PDLIM1O00151 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC14.06□□□□□ -0.16
PDLIM1O00151 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.06□□□□□ -0.16
PDLIM1O00151 MIR6069-201ENST00000620069 79 ntBASIC14.06□□□□□ -0.16
PDLIM1O00151 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.06□□□□□ -0.16
PDLIM1O00151 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.06□□□□□ -0.16
PDLIM1O00151 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
PDLIM1O00151 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PDLIM1O00151 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
PDLIM1O00151 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.06□□□□□ -0.16
PDLIM1O00151 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PDLIM1O00151 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
PDLIM1O00151 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PDLIM1O00151 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
PDLIM1O00151 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC14.06□□□□□ -0.16
PDLIM1O00151 BTNL8-201ENST00000231229 2229 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PDLIM1O00151 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PDLIM1O00151 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
PDLIM1O00151 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PDLIM1O00151 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
PDLIM1O00151 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
PDLIM1O00151 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC14.05□□□□□ -0.16
PDLIM1O00151 EPS15L1-202ENST00000455140 3266 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
PDLIM1O00151 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PDLIM1O00151 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC14.05□□□□□ -0.16
PDLIM1O00151 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PDLIM1O00151 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PDLIM1O00151 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
PDLIM1O00151 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
PDLIM1O00151 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PDLIM1O00151 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
PDLIM1O00151 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
PDLIM1O00151 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC14.05□□□□□ -0.16
PDLIM1O00151 NME1-209ENST00000511355 1645 ntTSL 5 BASIC14.05□□□□□ -0.16
PDLIM1O00151 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PDLIM1O00151 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
PDLIM1O00151 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PDLIM1O00151 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PDLIM1O00151 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
PDLIM1O00151 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.05□□□□□ -0.16
PDLIM1O00151 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PDLIM1O00151 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PDLIM1O00151 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PDLIM1O00151 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
PDLIM1O00151 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PDLIM1O00151 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.05□□□□□ -0.16
PDLIM1O00151 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
PDLIM1O00151 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PDLIM1O00151 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.05□□□□□ -0.16
PDLIM1O00151 AL512638.1-201ENST00000457493 794 ntBASIC14.05□□□□□ -0.16
PDLIM1O00151 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.05□□□□□ -0.16
PDLIM1O00151 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.05□□□□□ -0.16
PDLIM1O00151 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.05□□□□□ -0.16
PDLIM1O00151 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.05□□□□□ -0.16
PDLIM1O00151 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.05□□□□□ -0.16
PDLIM1O00151 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
PDLIM1O00151 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.05□□□□□ -0.16
PDLIM1O00151 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.05□□□□□ -0.16
PDLIM1O00151 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PDLIM1O00151 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PDLIM1O00151 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PDLIM1O00151 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
PDLIM1O00151 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
PDLIM1O00151 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PDLIM1O00151 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PDLIM1O00151 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
PDLIM1O00151 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
PDLIM1O00151 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PDLIM1O00151 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.05□□□□□ -0.16
PDLIM1O00151 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC14.05□□□□□ -0.16
PDLIM1O00151 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PDLIM1O00151 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PDLIM1O00151 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PDLIM1O00151 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
PDLIM1O00151 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PDLIM1O00151 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
PDLIM1O00151 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC14.04□□□□□ -0.16
PDLIM1O00151 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC14.04□□□□□ -0.16
PDLIM1O00151 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.04□□□□□ -0.16
PDLIM1O00151 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PDLIM1O00151 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PDLIM1O00151 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.04□□□□□ -0.16
PDLIM1O00151 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PDLIM1O00151 PCDHB18P-202ENST00000526308 3197 ntBASIC14.04□□□□□ -0.16
PDLIM1O00151 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms