Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SRRM4A7MD48 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
SRRM4A7MD48 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
SRRM4A7MD48 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SRRM4A7MD48 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SRRM4A7MD48 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC11.82□□□□□ -0.52
SRRM4A7MD48 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
SRRM4A7MD48 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SRRM4A7MD48 MPV17-205ENST00000402310 906 ntTSL 5 BASIC11.82□□□□□ -0.52
SRRM4A7MD48 AL512384.1-201ENST00000406683 331 ntBASIC11.82□□□□□ -0.52
SRRM4A7MD48 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC11.82□□□□□ -0.52
SRRM4A7MD48 FAM8A4P-201ENST00000435433 1213 ntBASIC11.82□□□□□ -0.52
SRRM4A7MD48 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC11.82□□□□□ -0.52
SRRM4A7MD48 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SRRM4A7MD48 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SRRM4A7MD48 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC11.82□□□□□ -0.52
SRRM4A7MD48 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SRRM4A7MD48 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SRRM4A7MD48 MIR4683-201ENST00000579659 81 ntBASIC11.82□□□□□ -0.52
SRRM4A7MD48 AC233724.13-201ENST00000598383 410 ntBASIC11.82□□□□□ -0.52
SRRM4A7MD48 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC11.82□□□□□ -0.52
SRRM4A7MD48 AL022328.1-201ENST00000610050 478 ntBASIC11.82□□□□□ -0.52
SRRM4A7MD48 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
SRRM4A7MD48 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC11.82□□□□□ -0.52
SRRM4A7MD48 MVK-217ENST00000639206 367 ntTSL 5 BASIC11.82□□□□□ -0.52
SRRM4A7MD48 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SRRM4A7MD48 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
SRRM4A7MD48 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
SRRM4A7MD48 HPD-204ENST00000543163 1709 ntTSL 5 BASIC11.82□□□□□ -0.52
SRRM4A7MD48 AL359881.3-201ENST00000602640 1721 ntBASIC11.82□□□□□ -0.52
SRRM4A7MD48 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SRRM4A7MD48 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SRRM4A7MD48 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC11.82□□□□□ -0.52
SRRM4A7MD48 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SRRM4A7MD48 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SRRM4A7MD48 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SRRM4A7MD48 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
SRRM4A7MD48 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SRRM4A7MD48 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SRRM4A7MD48 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SRRM4A7MD48 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC11.82□□□□□ -0.52
SRRM4A7MD48 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SRRM4A7MD48 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SRRM4A7MD48 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SRRM4A7MD48 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
SRRM4A7MD48 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
SRRM4A7MD48 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SRRM4A7MD48 AL137784.3-201ENST00000623858 2288 ntBASIC11.81□□□□□ -0.52
SRRM4A7MD48 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
SRRM4A7MD48 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SRRM4A7MD48 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC11.81□□□□□ -0.52
SRRM4A7MD48 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
SRRM4A7MD48 TCAM1P-207ENST00000485295 1537 ntBASIC11.81□□□□□ -0.52
SRRM4A7MD48 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
SRRM4A7MD48 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SRRM4A7MD48 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SRRM4A7MD48 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
SRRM4A7MD48 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
SRRM4A7MD48 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
SRRM4A7MD48 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
SRRM4A7MD48 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SRRM4A7MD48 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SRRM4A7MD48 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
SRRM4A7MD48 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SRRM4A7MD48 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC11.81□□□□□ -0.52
SRRM4A7MD48 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SRRM4A7MD48 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
SRRM4A7MD48 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
SRRM4A7MD48 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC11.81□□□□□ -0.52
SRRM4A7MD48 KRT8P24-201ENST00000560290 1559 ntBASIC11.81□□□□□ -0.52
SRRM4A7MD48 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
SRRM4A7MD48 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SRRM4A7MD48 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
SRRM4A7MD48 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
SRRM4A7MD48 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SRRM4A7MD48 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SRRM4A7MD48 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC11.81□□□□□ -0.52
SRRM4A7MD48 GRAP-202ENST00000395635 834 ntTSL 2 BASIC11.81□□□□□ -0.52
SRRM4A7MD48 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SRRM4A7MD48 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC11.81□□□□□ -0.52
SRRM4A7MD48 CD8B2-202ENST00000417670 633 ntBASIC11.81□□□□□ -0.52
SRRM4A7MD48 AC016694.1-201ENST00000434179 700 ntBASIC11.81□□□□□ -0.52
SRRM4A7MD48 TTTY23B-201ENST00000442790 549 ntBASIC11.81□□□□□ -0.52
SRRM4A7MD48 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC11.81□□□□□ -0.52
SRRM4A7MD48 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
SRRM4A7MD48 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC11.81□□□□□ -0.52
SRRM4A7MD48 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC11.81□□□□□ -0.52
SRRM4A7MD48 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC11.81□□□□□ -0.52
SRRM4A7MD48 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
SRRM4A7MD48 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC11.81□□□□□ -0.52
SRRM4A7MD48 AC078819.1-201ENST00000547454 765 ntBASIC11.81□□□□□ -0.52
SRRM4A7MD48 AC012085.1-201ENST00000548270 765 ntBASIC11.81□□□□□ -0.52
SRRM4A7MD48 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SRRM4A7MD48 RPL28-206ENST00000558752 671 ntTSL 3 BASIC11.81□□□□□ -0.52
SRRM4A7MD48 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC11.81□□□□□ -0.52
SRRM4A7MD48 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
SRRM4A7MD48 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
SRRM4A7MD48 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SRRM4A7MD48 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC11.81□□□□□ -0.52
SRRM4A7MD48 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms