Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.56□□□□□ -0.08
TBC1D3FA6NER0 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC14.56□□□□□ -0.08
TBC1D3FA6NER0 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
TBC1D3FA6NER0 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
TBC1D3FA6NER0 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
TBC1D3FA6NER0 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TBC1D3FA6NER0 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TBC1D3FA6NER0 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
TBC1D3FA6NER0 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
TBC1D3FA6NER0 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TBC1D3FA6NER0 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
TBC1D3FA6NER0 AC015909.3-201ENST00000572855 1794 ntBASIC14.56□□□□□ -0.08
TBC1D3FA6NER0 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
TBC1D3FA6NER0 UFM1-202ENST00000379649 846 ntTSL 4 BASIC14.56□□□□□ -0.08
TBC1D3FA6NER0 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TBC1D3FA6NER0 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC14.56□□□□□ -0.08
TBC1D3FA6NER0 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC14.56□□□□□ -0.08
TBC1D3FA6NER0 AC026320.2-201ENST00000434379 478 ntBASIC14.56□□□□□ -0.08
TBC1D3FA6NER0 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC14.56□□□□□ -0.08
TBC1D3FA6NER0 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC14.56□□□□□ -0.08
TBC1D3FA6NER0 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TBC1D3FA6NER0 RN7SL258P-201ENST00000478664 300 ntBASIC14.56□□□□□ -0.08
TBC1D3FA6NER0 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC14.56□□□□□ -0.08
TBC1D3FA6NER0 IGHVIII-5-2-201ENST00000522505 261 ntBASIC14.56□□□□□ -0.08
TBC1D3FA6NER0 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC14.56□□□□□ -0.08
TBC1D3FA6NER0 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC14.56□□□□□ -0.08
TBC1D3FA6NER0 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC14.56□□□□□ -0.08
TBC1D3FA6NER0 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
TBC1D3FA6NER0 AC026803.1-201ENST00000569130 274 ntBASIC14.56□□□□□ -0.08
TBC1D3FA6NER0 MIR4706-201ENST00000582134 82 ntBASIC14.56□□□□□ -0.08
TBC1D3FA6NER0 MIR3188-201ENST00000583494 85 ntBASIC14.56□□□□□ -0.08
TBC1D3FA6NER0 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC14.56□□□□□ -0.08
TBC1D3FA6NER0 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.56□□□□□ -0.08
TBC1D3FA6NER0 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TBC1D3FA6NER0 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TBC1D3FA6NER0 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TBC1D3FA6NER0 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TBC1D3FA6NER0 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.56□□□□□ -0.08
TBC1D3FA6NER0 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TBC1D3FA6NER0 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TBC1D3FA6NER0 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
TBC1D3FA6NER0 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC14.56□□□□□ -0.08
TBC1D3FA6NER0 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.56□□□□□ -0.08
TBC1D3FA6NER0 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TBC1D3FA6NER0 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TBC1D3FA6NER0 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
TBC1D3FA6NER0 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TBC1D3FA6NER0 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
TBC1D3FA6NER0 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
TBC1D3FA6NER0 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.56□□□□□ -0.08
TBC1D3FA6NER0 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TBC1D3FA6NER0 DBET-201ENST00000630918 3363 ntBASIC14.56□□□□□ -0.08
TBC1D3FA6NER0 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
TBC1D3FA6NER0 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TBC1D3FA6NER0 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
TBC1D3FA6NER0 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TBC1D3FA6NER0 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC14.55□□□□□ -0.08
TBC1D3FA6NER0 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.55□□□□□ -0.08
TBC1D3FA6NER0 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TBC1D3FA6NER0 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
TBC1D3FA6NER0 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TBC1D3FA6NER0 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TBC1D3FA6NER0 OR2I1P-210ENST00000642037 4691 ntBASIC14.55□□□□□ -0.08
TBC1D3FA6NER0 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.55□□□□□ -0.08
TBC1D3FA6NER0 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
TBC1D3FA6NER0 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TBC1D3FA6NER0 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
TBC1D3FA6NER0 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.55□□□□□ -0.08
TBC1D3FA6NER0 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
TBC1D3FA6NER0 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
TBC1D3FA6NER0 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TBC1D3FA6NER0 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TBC1D3FA6NER0 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.55□□□□□ -0.08
TBC1D3FA6NER0 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TBC1D3FA6NER0 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TBC1D3FA6NER0 AL627231.1-201ENST00000394467 1125 ntBASIC14.55□□□□□ -0.08
TBC1D3FA6NER0 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC14.55□□□□□ -0.08
TBC1D3FA6NER0 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC14.55□□□□□ -0.08
TBC1D3FA6NER0 TSPY25P-201ENST00000429463 745 ntBASIC14.55□□□□□ -0.08
TBC1D3FA6NER0 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
TBC1D3FA6NER0 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC14.55□□□□□ -0.08
TBC1D3FA6NER0 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TBC1D3FA6NER0 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TBC1D3FA6NER0 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC14.55□□□□□ -0.08
TBC1D3FA6NER0 STUB1-204ENST00000564370 875 ntTSL 2 BASIC14.55□□□□□ -0.08
TBC1D3FA6NER0 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC14.55□□□□□ -0.08
TBC1D3FA6NER0 AL109837.1-201ENST00000603272 613 ntBASIC14.55□□□□□ -0.08
TBC1D3FA6NER0 LINC01783-202ENST00000614408 828 ntBASIC14.55□□□□□ -0.08
TBC1D3FA6NER0 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC14.55□□□□□ -0.08
TBC1D3FA6NER0 BX284668.2-205ENST00000619677 828 ntBASIC14.55□□□□□ -0.08
TBC1D3FA6NER0 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TBC1D3FA6NER0 CDK7-214ENST00000626796 358 ntTSL 5 BASIC14.55□□□□□ -0.08
TBC1D3FA6NER0 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC14.55□□□□□ -0.08
TBC1D3FA6NER0 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TBC1D3FA6NER0 AC018529.2-202ENST00000611482 3087 ntBASIC14.55□□□□□ -0.08
TBC1D3FA6NER0 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TBC1D3FA6NER0 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TBC1D3FA6NER0 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC14.55□□□□□ -0.08
TBC1D3FA6NER0 FAM90A2P-201ENST00000511144 1395 ntBASIC14.55□□□□□ -0.08
TBC1D3FA6NER0 FAM90A25P-201ENST00000528404 1395 ntBASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms