Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
RCCD1A6NED2 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
RCCD1A6NED2 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RCCD1A6NED2 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
RCCD1A6NED2 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
RCCD1A6NED2 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RCCD1A6NED2 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
RCCD1A6NED2 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
RCCD1A6NED2 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RCCD1A6NED2 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
RCCD1A6NED2 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
RCCD1A6NED2 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
RCCD1A6NED2 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC15.6■□□□□ 0.09
RCCD1A6NED2 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RCCD1A6NED2 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RCCD1A6NED2 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC15.6■□□□□ 0.09
RCCD1A6NED2 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RCCD1A6NED2 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RCCD1A6NED2 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC15.6■□□□□ 0.09
RCCD1A6NED2 KATNBL1P2-201ENST00000433311 835 ntBASIC15.6■□□□□ 0.09
RCCD1A6NED2 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
RCCD1A6NED2 ELK1P1-201ENST00000485699 580 ntBASIC15.6■□□□□ 0.09
RCCD1A6NED2 AC093214.1-201ENST00000511688 1107 ntBASIC15.6■□□□□ 0.09
RCCD1A6NED2 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RCCD1A6NED2 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RCCD1A6NED2 RAB30-AS1-205ENST00000530270 1116 ntTSL 2 BASIC15.6■□□□□ 0.09
RCCD1A6NED2 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RCCD1A6NED2 DUT-210ENST00000559935 569 ntTSL 3 BASIC15.6■□□□□ 0.09
RCCD1A6NED2 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC15.6■□□□□ 0.09
RCCD1A6NED2 AC110921.1-201ENST00000577544 612 ntTSL 3 BASIC15.6■□□□□ 0.09
RCCD1A6NED2 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
RCCD1A6NED2 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RCCD1A6NED2 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.6■□□□□ 0.09
RCCD1A6NED2 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RCCD1A6NED2 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
RCCD1A6NED2 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
RCCD1A6NED2 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC15.6■□□□□ 0.09
RCCD1A6NED2 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC15.6■□□□□ 0.09
RCCD1A6NED2 FKBP4P6-201ENST00000457486 1332 ntBASIC15.6■□□□□ 0.09
RCCD1A6NED2 AC064801.2-201ENST00000625052 1303 ntBASIC15.6■□□□□ 0.09
RCCD1A6NED2 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RCCD1A6NED2 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RCCD1A6NED2 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
RCCD1A6NED2 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
RCCD1A6NED2 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RCCD1A6NED2 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
RCCD1A6NED2 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
RCCD1A6NED2 KRT8P28-201ENST00000433288 1390 ntBASIC15.6■□□□□ 0.09
RCCD1A6NED2 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RCCD1A6NED2 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RCCD1A6NED2 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RCCD1A6NED2 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
RCCD1A6NED2 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RCCD1A6NED2 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC15.59■□□□□ 0.09
RCCD1A6NED2 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RCCD1A6NED2 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC15.59■□□□□ 0.09
RCCD1A6NED2 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RCCD1A6NED2 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC15.59■□□□□ 0.09
RCCD1A6NED2 BASP1P1-201ENST00000430708 665 ntBASIC15.59■□□□□ 0.09
RCCD1A6NED2 AC245100.3-201ENST00000441281 285 ntBASIC15.59■□□□□ 0.09
RCCD1A6NED2 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RCCD1A6NED2 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC15.59■□□□□ 0.09
RCCD1A6NED2 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
RCCD1A6NED2 AC004672.2-201ENST00000537181 574 ntTSL 2 BASIC15.59■□□□□ 0.09
RCCD1A6NED2 AP001063.1-201ENST00000568332 529 ntBASIC15.59■□□□□ 0.09
RCCD1A6NED2 AC027796.2-201ENST00000575326 344 ntBASIC15.59■□□□□ 0.09
RCCD1A6NED2 CTBP2P3-201ENST00000585629 1255 ntBASIC15.59■□□□□ 0.09
RCCD1A6NED2 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC15.59■□□□□ 0.09
RCCD1A6NED2 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
RCCD1A6NED2 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC15.59■□□□□ 0.09
RCCD1A6NED2 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RCCD1A6NED2 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
RCCD1A6NED2 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RCCD1A6NED2 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RCCD1A6NED2 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.59■□□□□ 0.09
RCCD1A6NED2 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
RCCD1A6NED2 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RCCD1A6NED2 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC15.59■□□□□ 0.09
RCCD1A6NED2 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RCCD1A6NED2 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
RCCD1A6NED2 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
RCCD1A6NED2 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
RCCD1A6NED2 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
RCCD1A6NED2 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
RCCD1A6NED2 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
RCCD1A6NED2 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
RCCD1A6NED2 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RCCD1A6NED2 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RCCD1A6NED2 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RCCD1A6NED2 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
RCCD1A6NED2 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC15.58■□□□□ 0.08
RCCD1A6NED2 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC15.58■□□□□ 0.08
RCCD1A6NED2 RAC2-204ENST00000406508 893 ntTSL 5 BASIC15.58■□□□□ 0.08
RCCD1A6NED2 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC15.58■□□□□ 0.08
RCCD1A6NED2 YY1P1-201ENST00000427625 668 ntBASIC15.58■□□□□ 0.08
RCCD1A6NED2 UPF3AP2-201ENST00000457924 1132 ntBASIC15.58■□□□□ 0.08
RCCD1A6NED2 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC15.58■□□□□ 0.08
RCCD1A6NED2 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC15.58■□□□□ 0.08
RCCD1A6NED2 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RCCD1A6NED2 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms