Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
CSNK1G3Q9Y6M4 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CSNK1G3Q9Y6M4 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC14.35□□□□□ -0.11
CSNK1G3Q9Y6M4 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC14.35□□□□□ -0.11
CSNK1G3Q9Y6M4 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC14.35□□□□□ -0.11
CSNK1G3Q9Y6M4 XBP1P1-201ENST00000436573 652 ntBASIC14.35□□□□□ -0.11
CSNK1G3Q9Y6M4 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC14.35□□□□□ -0.11
CSNK1G3Q9Y6M4 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC14.35□□□□□ -0.11
CSNK1G3Q9Y6M4 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC14.35□□□□□ -0.11
CSNK1G3Q9Y6M4 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC14.35□□□□□ -0.11
CSNK1G3Q9Y6M4 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CSNK1G3Q9Y6M4 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CSNK1G3Q9Y6M4 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC14.35□□□□□ -0.11
CSNK1G3Q9Y6M4 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
CSNK1G3Q9Y6M4 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CSNK1G3Q9Y6M4 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC14.35□□□□□ -0.11
CSNK1G3Q9Y6M4 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CSNK1G3Q9Y6M4 AC103691.2-201ENST00000618824 433 ntBASIC14.35□□□□□ -0.11
CSNK1G3Q9Y6M4 STK26-204ENST00000481105 1835 ntTSL 2 BASIC14.35□□□□□ -0.11
CSNK1G3Q9Y6M4 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CSNK1G3Q9Y6M4 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.35□□□□□ -0.11
CSNK1G3Q9Y6M4 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CSNK1G3Q9Y6M4 F10-203ENST00000409306 1450 ntTSL 3 BASIC14.35□□□□□ -0.11
CSNK1G3Q9Y6M4 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CSNK1G3Q9Y6M4 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CSNK1G3Q9Y6M4 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CSNK1G3Q9Y6M4 MRPL37P1-201ENST00000592451 1337 ntBASIC14.35□□□□□ -0.11
CSNK1G3Q9Y6M4 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CSNK1G3Q9Y6M4 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CSNK1G3Q9Y6M4 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CSNK1G3Q9Y6M4 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CSNK1G3Q9Y6M4 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.35□□□□□ -0.11
CSNK1G3Q9Y6M4 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
CSNK1G3Q9Y6M4 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
CSNK1G3Q9Y6M4 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSNK1G3Q9Y6M4 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.34□□□□□ -0.11
CSNK1G3Q9Y6M4 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSNK1G3Q9Y6M4 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.34□□□□□ -0.11
CSNK1G3Q9Y6M4 AL365209.1-201ENST00000624418 6473 ntBASIC14.34□□□□□ -0.11
CSNK1G3Q9Y6M4 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.34□□□□□ -0.11
CSNK1G3Q9Y6M4 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.34□□□□□ -0.11
CSNK1G3Q9Y6M4 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC14.34□□□□□ -0.11
CSNK1G3Q9Y6M4 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC14.34□□□□□ -0.11
CSNK1G3Q9Y6M4 TBC1D3J-201ENST00000620719 1426 ntBASIC14.34□□□□□ -0.11
CSNK1G3Q9Y6M4 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CSNK1G3Q9Y6M4 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSNK1G3Q9Y6M4 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.34□□□□□ -0.11
CSNK1G3Q9Y6M4 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSNK1G3Q9Y6M4 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSNK1G3Q9Y6M4 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSNK1G3Q9Y6M4 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSNK1G3Q9Y6M4 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CSNK1G3Q9Y6M4 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSNK1G3Q9Y6M4 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC14.34□□□□□ -0.11
CSNK1G3Q9Y6M4 NCR3-202ENST00000376071 541 ntTSL 5 BASIC14.34□□□□□ -0.11
CSNK1G3Q9Y6M4 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSNK1G3Q9Y6M4 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC14.34□□□□□ -0.11
CSNK1G3Q9Y6M4 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC14.34□□□□□ -0.11
CSNK1G3Q9Y6M4 HNRNPA1P27-201ENST00000412087 955 ntBASIC14.34□□□□□ -0.11
CSNK1G3Q9Y6M4 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC14.34□□□□□ -0.11
CSNK1G3Q9Y6M4 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC14.34□□□□□ -0.11
CSNK1G3Q9Y6M4 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSNK1G3Q9Y6M4 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC14.34□□□□□ -0.11
CSNK1G3Q9Y6M4 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC14.34□□□□□ -0.11
CSNK1G3Q9Y6M4 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC14.34□□□□□ -0.11
CSNK1G3Q9Y6M4 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSNK1G3Q9Y6M4 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSNK1G3Q9Y6M4 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC14.34□□□□□ -0.11
CSNK1G3Q9Y6M4 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CSNK1G3Q9Y6M4 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC14.34□□□□□ -0.11
CSNK1G3Q9Y6M4 STUB1-204ENST00000564370 875 ntTSL 2 BASIC14.34□□□□□ -0.11
CSNK1G3Q9Y6M4 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CSNK1G3Q9Y6M4 MIR3188-201ENST00000583494 85 ntBASIC14.34□□□□□ -0.11
CSNK1G3Q9Y6M4 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC14.34□□□□□ -0.11
CSNK1G3Q9Y6M4 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
CSNK1G3Q9Y6M4 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CSNK1G3Q9Y6M4 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSNK1G3Q9Y6M4 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSNK1G3Q9Y6M4 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSNK1G3Q9Y6M4 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSNK1G3Q9Y6M4 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSNK1G3Q9Y6M4 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CSNK1G3Q9Y6M4 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CSNK1G3Q9Y6M4 AHCYP4-201ENST00000419201 1315 ntBASIC14.34□□□□□ -0.11
CSNK1G3Q9Y6M4 AC006480.2-201ENST00000609770 1337 ntBASIC14.34□□□□□ -0.11
CSNK1G3Q9Y6M4 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSNK1G3Q9Y6M4 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSNK1G3Q9Y6M4 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.34□□□□□ -0.11
CSNK1G3Q9Y6M4 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSNK1G3Q9Y6M4 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.34□□□□□ -0.11
CSNK1G3Q9Y6M4 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CSNK1G3Q9Y6M4 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CSNK1G3Q9Y6M4 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CSNK1G3Q9Y6M4 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CSNK1G3Q9Y6M4 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSNK1G3Q9Y6M4 CYP4F23P-201ENST00000593402 1579 ntBASIC14.34□□□□□ -0.11
CSNK1G3Q9Y6M4 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSNK1G3Q9Y6M4 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CSNK1G3Q9Y6M4 FAM90A2P-201ENST00000511144 1395 ntBASIC14.34□□□□□ -0.11
CSNK1G3Q9Y6M4 FAM90A25P-201ENST00000528404 1395 ntBASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms