Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAI2Q9Y5P3 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
RAI2Q9Y5P3 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
RAI2Q9Y5P3 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC14.85□□□□□ -0.03
RAI2Q9Y5P3 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC14.85□□□□□ -0.03
RAI2Q9Y5P3 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
RAI2Q9Y5P3 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC14.85□□□□□ -0.03
RAI2Q9Y5P3 PTPA-215ENST00000432124 567 ntTSL 4 BASIC14.85□□□□□ -0.03
RAI2Q9Y5P3 RPS2P36-201ENST00000456516 831 ntBASIC14.85□□□□□ -0.03
RAI2Q9Y5P3 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC14.85□□□□□ -0.03
RAI2Q9Y5P3 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC14.85□□□□□ -0.03
RAI2Q9Y5P3 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RAI2Q9Y5P3 RERG-205ENST00000537647 935 ntTSL 2 BASIC14.85□□□□□ -0.03
RAI2Q9Y5P3 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
RAI2Q9Y5P3 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC14.85□□□□□ -0.03
RAI2Q9Y5P3 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
RAI2Q9Y5P3 SPCS2P2-201ENST00000603270 608 ntBASIC14.85□□□□□ -0.03
RAI2Q9Y5P3 AL096828.3-201ENST00000615354 462 ntBASIC14.85□□□□□ -0.03
RAI2Q9Y5P3 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
RAI2Q9Y5P3 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAI2Q9Y5P3 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAI2Q9Y5P3 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAI2Q9Y5P3 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.85□□□□□ -0.03
RAI2Q9Y5P3 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAI2Q9Y5P3 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAI2Q9Y5P3 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
RAI2Q9Y5P3 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
RAI2Q9Y5P3 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAI2Q9Y5P3 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAI2Q9Y5P3 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
RAI2Q9Y5P3 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAI2Q9Y5P3 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.85□□□□□ -0.03
RAI2Q9Y5P3 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.84□□□□□ -0.03
RAI2Q9Y5P3 AC015802.1-201ENST00000588104 1449 ntBASIC14.84□□□□□ -0.03
RAI2Q9Y5P3 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
RAI2Q9Y5P3 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAI2Q9Y5P3 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAI2Q9Y5P3 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAI2Q9Y5P3 AC091046.1-201ENST00000331871 207 ntBASIC14.84□□□□□ -0.03
RAI2Q9Y5P3 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAI2Q9Y5P3 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC14.84□□□□□ -0.03
RAI2Q9Y5P3 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC14.84□□□□□ -0.03
RAI2Q9Y5P3 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAI2Q9Y5P3 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC14.84□□□□□ -0.03
RAI2Q9Y5P3 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC14.84□□□□□ -0.03
RAI2Q9Y5P3 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC14.84□□□□□ -0.03
RAI2Q9Y5P3 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAI2Q9Y5P3 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC14.84□□□□□ -0.03
RAI2Q9Y5P3 MIR7845-201ENST00000618396 99 ntBASIC14.84□□□□□ -0.03
RAI2Q9Y5P3 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC14.84□□□□□ -0.03
RAI2Q9Y5P3 AL162426.1-201ENST00000624141 743 ntBASIC14.84□□□□□ -0.03
RAI2Q9Y5P3 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC14.84□□□□□ -0.03
RAI2Q9Y5P3 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC14.84□□□□□ -0.03
RAI2Q9Y5P3 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAI2Q9Y5P3 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
RAI2Q9Y5P3 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RAI2Q9Y5P3 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RAI2Q9Y5P3 GRN-222ENST00000639447 1314 ntTSL 2 BASIC14.84□□□□□ -0.03
RAI2Q9Y5P3 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.84□□□□□ -0.03
RAI2Q9Y5P3 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAI2Q9Y5P3 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
RAI2Q9Y5P3 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
RAI2Q9Y5P3 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.84□□□□□ -0.03
RAI2Q9Y5P3 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
RAI2Q9Y5P3 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC14.84□□□□□ -0.03
RAI2Q9Y5P3 FAM45BP-202ENST00000592932 1624 ntBASIC14.84□□□□□ -0.03
RAI2Q9Y5P3 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAI2Q9Y5P3 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAI2Q9Y5P3 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAI2Q9Y5P3 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC14.84□□□□□ -0.03
RAI2Q9Y5P3 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
RAI2Q9Y5P3 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAI2Q9Y5P3 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
RAI2Q9Y5P3 AC009093.10-201ENST00000641956 1442 ntBASIC14.83□□□□□ -0.03
RAI2Q9Y5P3 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
RAI2Q9Y5P3 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
RAI2Q9Y5P3 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.03
RAI2Q9Y5P3 AC138028.6-201ENST00000616106 1482 ntBASIC14.83□□□□□ -0.03
RAI2Q9Y5P3 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.83□□□□□ -0.03
RAI2Q9Y5P3 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
RAI2Q9Y5P3 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RAI2Q9Y5P3 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
RAI2Q9Y5P3 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.83□□□□□ -0.04
RAI2Q9Y5P3 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RAI2Q9Y5P3 AC215219.1-201ENST00000400706 1817 ntBASIC14.83□□□□□ -0.04
RAI2Q9Y5P3 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAI2Q9Y5P3 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAI2Q9Y5P3 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.83□□□□□ -0.04
RAI2Q9Y5P3 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAI2Q9Y5P3 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.83□□□□□ -0.04
RAI2Q9Y5P3 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
RAI2Q9Y5P3 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RAI2Q9Y5P3 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAI2Q9Y5P3 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAI2Q9Y5P3 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAI2Q9Y5P3 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RAI2Q9Y5P3 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAI2Q9Y5P3 HNRNPA1P27-201ENST00000412087 955 ntBASIC14.83□□□□□ -0.04
RAI2Q9Y5P3 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC14.83□□□□□ -0.04
RAI2Q9Y5P3 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms