Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC14.68□□□□□ -0.06
PCDHB1Q9Y5F3 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.68□□□□□ -0.06
PCDHB1Q9Y5F3 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHB1Q9Y5F3 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
PCDHB1Q9Y5F3 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
PCDHB1Q9Y5F3 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.68□□□□□ -0.06
PCDHB1Q9Y5F3 AC015656.1-201ENST00000624209 3578 ntBASIC14.68□□□□□ -0.06
PCDHB1Q9Y5F3 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHB1Q9Y5F3 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHB1Q9Y5F3 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
PCDHB1Q9Y5F3 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHB1Q9Y5F3 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHB1Q9Y5F3 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHB1Q9Y5F3 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHB1Q9Y5F3 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
PCDHB1Q9Y5F3 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHB1Q9Y5F3 INE2-201ENST00000630399 1874 ntBASIC14.68□□□□□ -0.06
PCDHB1Q9Y5F3 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHB1Q9Y5F3 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
PCDHB1Q9Y5F3 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHB1Q9Y5F3 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.68□□□□□ -0.06
PCDHB1Q9Y5F3 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHB1Q9Y5F3 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHB1Q9Y5F3 AC016700.1-201ENST00000429424 312 ntBASIC14.68□□□□□ -0.06
PCDHB1Q9Y5F3 NKAIN1P1-201ENST00000435754 582 ntBASIC14.68□□□□□ -0.06
PCDHB1Q9Y5F3 MPRIPP1-201ENST00000452433 1089 ntBASIC14.68□□□□□ -0.06
PCDHB1Q9Y5F3 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHB1Q9Y5F3 RN7SL769P-201ENST00000469386 295 ntBASIC14.68□□□□□ -0.06
PCDHB1Q9Y5F3 AC044849.1-201ENST00000519737 1188 ntBASIC14.68□□□□□ -0.06
PCDHB1Q9Y5F3 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC14.68□□□□□ -0.06
PCDHB1Q9Y5F3 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC14.68□□□□□ -0.06
PCDHB1Q9Y5F3 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC14.68□□□□□ -0.06
PCDHB1Q9Y5F3 AC007663.3-201ENST00000609632 465 ntBASIC14.68□□□□□ -0.06
PCDHB1Q9Y5F3 MIR6074-201ENST00000612054 107 ntBASIC14.68□□□□□ -0.06
PCDHB1Q9Y5F3 AP001002.3-201ENST00000623482 206 ntBASIC14.68□□□□□ -0.06
PCDHB1Q9Y5F3 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHB1Q9Y5F3 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHB1Q9Y5F3 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.68□□□□□ -0.06
PCDHB1Q9Y5F3 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.68□□□□□ -0.06
PCDHB1Q9Y5F3 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHB1Q9Y5F3 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHB1Q9Y5F3 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHB1Q9Y5F3 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHB1Q9Y5F3 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.68□□□□□ -0.06
PCDHB1Q9Y5F3 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHB1Q9Y5F3 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHB1Q9Y5F3 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHB1Q9Y5F3 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
PCDHB1Q9Y5F3 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.67□□□□□ -0.06
PCDHB1Q9Y5F3 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
PCDHB1Q9Y5F3 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHB1Q9Y5F3 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHB1Q9Y5F3 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHB1Q9Y5F3 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHB1Q9Y5F3 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHB1Q9Y5F3 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC14.67□□□□□ -0.06
PCDHB1Q9Y5F3 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC14.67□□□□□ -0.06
PCDHB1Q9Y5F3 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.67□□□□□ -0.06
PCDHB1Q9Y5F3 AC015688.4-201ENST00000580780 1647 ntBASIC14.67□□□□□ -0.06
PCDHB1Q9Y5F3 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHB1Q9Y5F3 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHB1Q9Y5F3 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC14.67□□□□□ -0.06
PCDHB1Q9Y5F3 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHB1Q9Y5F3 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHB1Q9Y5F3 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHB1Q9Y5F3 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
PCDHB1Q9Y5F3 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHB1Q9Y5F3 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC14.67□□□□□ -0.06
PCDHB1Q9Y5F3 AC079178.1-201ENST00000420915 656 ntBASIC14.67□□□□□ -0.06
PCDHB1Q9Y5F3 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC14.67□□□□□ -0.06
PCDHB1Q9Y5F3 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC14.67□□□□□ -0.06
PCDHB1Q9Y5F3 PUDPP3-201ENST00000445368 636 ntBASIC14.67□□□□□ -0.06
PCDHB1Q9Y5F3 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC14.67□□□□□ -0.06
PCDHB1Q9Y5F3 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHB1Q9Y5F3 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC14.67□□□□□ -0.06
PCDHB1Q9Y5F3 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC14.67□□□□□ -0.06
PCDHB1Q9Y5F3 MIR4706-201ENST00000582134 82 ntBASIC14.67□□□□□ -0.06
PCDHB1Q9Y5F3 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
PCDHB1Q9Y5F3 OR10B1P-201ENST00000601666 907 ntBASIC14.67□□□□□ -0.06
PCDHB1Q9Y5F3 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHB1Q9Y5F3 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHB1Q9Y5F3 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHB1Q9Y5F3 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
PCDHB1Q9Y5F3 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHB1Q9Y5F3 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHB1Q9Y5F3 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHB1Q9Y5F3 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.67□□□□□ -0.06
PCDHB1Q9Y5F3 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHB1Q9Y5F3 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHB1Q9Y5F3 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
PCDHB1Q9Y5F3 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
PCDHB1Q9Y5F3 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC14.66□□□□□ -0.06
PCDHB1Q9Y5F3 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHB1Q9Y5F3 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
PCDHB1Q9Y5F3 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.66□□□□□ -0.06
PCDHB1Q9Y5F3 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC14.66□□□□□ -0.06
PCDHB1Q9Y5F3 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
PCDHB1Q9Y5F3 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHB1Q9Y5F3 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC14.66□□□□□ -0.06
PCDHB1Q9Y5F3 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms