Protein–RNA interactions for Protein: Q9Y4K3

TRAF6, TNF receptor-associated factor 6, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF6Q9Y4K3 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAF6Q9Y4K3 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAF6Q9Y4K3 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRAF6Q9Y4K3 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAF6Q9Y4K3 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
TRAF6Q9Y4K3 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAF6Q9Y4K3 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAF6Q9Y4K3 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.34□□□□□ -0.11
TRAF6Q9Y4K3 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC14.34□□□□□ -0.11
TRAF6Q9Y4K3 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAF6Q9Y4K3 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAF6Q9Y4K3 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAF6Q9Y4K3 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAF6Q9Y4K3 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRAF6Q9Y4K3 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
TRAF6Q9Y4K3 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRAF6Q9Y4K3 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRAF6Q9Y4K3 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
TRAF6Q9Y4K3 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC14.33□□□□□ -0.11
TRAF6Q9Y4K3 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRAF6Q9Y4K3 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
TRAF6Q9Y4K3 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC14.33□□□□□ -0.12
TRAF6Q9Y4K3 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC14.33□□□□□ -0.12
TRAF6Q9Y4K3 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
TRAF6Q9Y4K3 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAF6Q9Y4K3 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRAF6Q9Y4K3 USE1-206ENST00000595101 1776 ntTSL 2 BASIC14.33□□□□□ -0.12
TRAF6Q9Y4K3 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
TRAF6Q9Y4K3 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAF6Q9Y4K3 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAF6Q9Y4K3 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRAF6Q9Y4K3 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC14.33□□□□□ -0.12
TRAF6Q9Y4K3 DFFBP1-201ENST00000433250 979 ntBASIC14.33□□□□□ -0.12
TRAF6Q9Y4K3 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRAF6Q9Y4K3 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.33□□□□□ -0.12
TRAF6Q9Y4K3 SORD2P-201ENST00000558556 1069 ntBASIC14.33□□□□□ -0.12
TRAF6Q9Y4K3 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC14.33□□□□□ -0.12
TRAF6Q9Y4K3 AP001063.1-201ENST00000568332 529 ntBASIC14.33□□□□□ -0.12
TRAF6Q9Y4K3 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC14.33□□□□□ -0.12
TRAF6Q9Y4K3 CLUHP6-201ENST00000580789 941 ntBASIC14.33□□□□□ -0.12
TRAF6Q9Y4K3 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14.33□□□□□ -0.12
TRAF6Q9Y4K3 AC138696.2-201ENST00000607376 223 ntBASIC14.33□□□□□ -0.12
TRAF6Q9Y4K3 BX088702.1-201ENST00000610784 235 ntBASIC14.33□□□□□ -0.12
TRAF6Q9Y4K3 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC14.33□□□□□ -0.12
TRAF6Q9Y4K3 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
TRAF6Q9Y4K3 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRAF6Q9Y4K3 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAF6Q9Y4K3 AC020910.5-201ENST00000623668 1865 ntBASIC14.33□□□□□ -0.12
TRAF6Q9Y4K3 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAF6Q9Y4K3 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC14.33□□□□□ -0.12
TRAF6Q9Y4K3 AC111170.3-201ENST00000624282 2464 ntBASIC14.33□□□□□ -0.12
TRAF6Q9Y4K3 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRAF6Q9Y4K3 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC14.33□□□□□ -0.12
TRAF6Q9Y4K3 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC14.32□□□□□ -0.12
TRAF6Q9Y4K3 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
TRAF6Q9Y4K3 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAF6Q9Y4K3 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAF6Q9Y4K3 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
TRAF6Q9Y4K3 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
TRAF6Q9Y4K3 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAF6Q9Y4K3 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAF6Q9Y4K3 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAF6Q9Y4K3 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC14.32□□□□□ -0.12
TRAF6Q9Y4K3 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAF6Q9Y4K3 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAF6Q9Y4K3 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAF6Q9Y4K3 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAF6Q9Y4K3 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAF6Q9Y4K3 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.32□□□□□ -0.12
TRAF6Q9Y4K3 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAF6Q9Y4K3 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC14.32□□□□□ -0.12
TRAF6Q9Y4K3 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAF6Q9Y4K3 MESTP3-201ENST00000503460 968 ntBASIC14.32□□□□□ -0.12
TRAF6Q9Y4K3 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
TRAF6Q9Y4K3 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAF6Q9Y4K3 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC14.32□□□□□ -0.12
TRAF6Q9Y4K3 AC005498.2-205ENST00000593218 784 ntBASIC14.32□□□□□ -0.12
TRAF6Q9Y4K3 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAF6Q9Y4K3 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAF6Q9Y4K3 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAF6Q9Y4K3 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC14.32□□□□□ -0.12
TRAF6Q9Y4K3 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAF6Q9Y4K3 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAF6Q9Y4K3 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAF6Q9Y4K3 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAF6Q9Y4K3 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
TRAF6Q9Y4K3 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
TRAF6Q9Y4K3 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAF6Q9Y4K3 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
TRAF6Q9Y4K3 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAF6Q9Y4K3 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAF6Q9Y4K3 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC14.32□□□□□ -0.12
TRAF6Q9Y4K3 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
TRAF6Q9Y4K3 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
TRAF6Q9Y4K3 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAF6Q9Y4K3 ADAMTS7P1-201ENST00000613213 4793 ntBASIC14.32□□□□□ -0.12
TRAF6Q9Y4K3 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAF6Q9Y4K3 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAF6Q9Y4K3 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
TRAF6Q9Y4K3 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms