Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
KCNIP3Q9Y2W7 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
KCNIP3Q9Y2W7 PP7080-204ENST00000510714 601 ntTSL 3 BASIC12.35□□□□□ -0.43
KCNIP3Q9Y2W7 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
KCNIP3Q9Y2W7 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC12.35□□□□□ -0.43
KCNIP3Q9Y2W7 AC040169.1-201ENST00000565382 521 ntBASIC12.35□□□□□ -0.43
KCNIP3Q9Y2W7 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC12.35□□□□□ -0.43
KCNIP3Q9Y2W7 PIN1-206ENST00000587625 878 ntTSL 2 BASIC12.35□□□□□ -0.43
KCNIP3Q9Y2W7 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC12.35□□□□□ -0.43
KCNIP3Q9Y2W7 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
KCNIP3Q9Y2W7 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
KCNIP3Q9Y2W7 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC12.35□□□□□ -0.43
KCNIP3Q9Y2W7 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
KCNIP3Q9Y2W7 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
KCNIP3Q9Y2W7 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
KCNIP3Q9Y2W7 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
KCNIP3Q9Y2W7 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
KCNIP3Q9Y2W7 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
KCNIP3Q9Y2W7 SH3BP2-203ENST00000442312 9211 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
KCNIP3Q9Y2W7 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC12.35□□□□□ -0.43
KCNIP3Q9Y2W7 ROBO1-212ENST00000618833 7492 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
KCNIP3Q9Y2W7 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
KCNIP3Q9Y2W7 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC12.35□□□□□ -0.43
KCNIP3Q9Y2W7 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC12.35□□□□□ -0.43
KCNIP3Q9Y2W7 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC12.35□□□□□ -0.43
KCNIP3Q9Y2W7 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
KCNIP3Q9Y2W7 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC12.35□□□□□ -0.43
KCNIP3Q9Y2W7 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
KCNIP3Q9Y2W7 AC015909.5-201ENST00000624336 2266 ntBASIC12.35□□□□□ -0.43
KCNIP3Q9Y2W7 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
KCNIP3Q9Y2W7 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
KCNIP3Q9Y2W7 KRT8P35-201ENST00000483942 1338 ntBASIC12.35□□□□□ -0.43
KCNIP3Q9Y2W7 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
KCNIP3Q9Y2W7 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
KCNIP3Q9Y2W7 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
KCNIP3Q9Y2W7 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
KCNIP3Q9Y2W7 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
KCNIP3Q9Y2W7 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
KCNIP3Q9Y2W7 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
KCNIP3Q9Y2W7 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
KCNIP3Q9Y2W7 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
KCNIP3Q9Y2W7 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
KCNIP3Q9Y2W7 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
KCNIP3Q9Y2W7 EIF4G1-205ENST00000382330 5129 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
KCNIP3Q9Y2W7 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC12.34□□□□□ -0.43
KCNIP3Q9Y2W7 SLX4-201ENST00000294008 7307 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
KCNIP3Q9Y2W7 SHANK2-218ENST00000601538 9062 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
KCNIP3Q9Y2W7 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
KCNIP3Q9Y2W7 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
KCNIP3Q9Y2W7 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
KCNIP3Q9Y2W7 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
KCNIP3Q9Y2W7 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC12.34□□□□□ -0.43
KCNIP3Q9Y2W7 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
KCNIP3Q9Y2W7 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
KCNIP3Q9Y2W7 MAOA-204ENST00000542639 5438 ntTSL 2 BASIC12.34□□□□□ -0.43
KCNIP3Q9Y2W7 FN1-201ENST00000323926 8708 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
KCNIP3Q9Y2W7 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
KCNIP3Q9Y2W7 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
KCNIP3Q9Y2W7 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
KCNIP3Q9Y2W7 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
KCNIP3Q9Y2W7 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
KCNIP3Q9Y2W7 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
KCNIP3Q9Y2W7 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
KCNIP3Q9Y2W7 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC12.34□□□□□ -0.43
KCNIP3Q9Y2W7 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
KCNIP3Q9Y2W7 SPDYE7P-202ENST00000420373 878 ntBASIC12.34□□□□□ -0.43
KCNIP3Q9Y2W7 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC12.34□□□□□ -0.43
KCNIP3Q9Y2W7 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
KCNIP3Q9Y2W7 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC12.34□□□□□ -0.43
KCNIP3Q9Y2W7 AC092364.2-202ENST00000597012 1073 ntBASIC12.34□□□□□ -0.43
KCNIP3Q9Y2W7 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
KCNIP3Q9Y2W7 AC105339.1-204ENST00000636249 355 ntBASIC12.34□□□□□ -0.43
KCNIP3Q9Y2W7 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
KCNIP3Q9Y2W7 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
KCNIP3Q9Y2W7 CACNA1G-209ENST00000502264 6921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
KCNIP3Q9Y2W7 CACNA1G-221ENST00000510115 6912 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
KCNIP3Q9Y2W7 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
KCNIP3Q9Y2W7 FOS-202ENST00000535987 1402 ntTSL 2 BASIC12.34□□□□□ -0.43
KCNIP3Q9Y2W7 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
KCNIP3Q9Y2W7 ACVR2A-201ENST00000241416 5728 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
KCNIP3Q9Y2W7 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
KCNIP3Q9Y2W7 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
KCNIP3Q9Y2W7 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
KCNIP3Q9Y2W7 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC12.34□□□□□ -0.43
KCNIP3Q9Y2W7 UNC13B-207ENST00000619578 6426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
KCNIP3Q9Y2W7 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
KCNIP3Q9Y2W7 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
KCNIP3Q9Y2W7 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
KCNIP3Q9Y2W7 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC12.34□□□□□ -0.43
KCNIP3Q9Y2W7 CELSR3-201ENST00000164024 11956 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
KCNIP3Q9Y2W7 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
KCNIP3Q9Y2W7 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC12.34□□□□□ -0.43
KCNIP3Q9Y2W7 CLK3P2-201ENST00000427566 1453 ntBASIC12.34□□□□□ -0.43
KCNIP3Q9Y2W7 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
KCNIP3Q9Y2W7 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC12.34□□□□□ -0.43
KCNIP3Q9Y2W7 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
KCNIP3Q9Y2W7 KIAA1614-202ENST00000367588 9654 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
KCNIP3Q9Y2W7 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC12.33□□□□□ -0.43
KCNIP3Q9Y2W7 URGCP-201ENST00000336086 5658 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.43
KCNIP3Q9Y2W7 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms