Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
SHANK2Q9UPX8 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC21.16■□□□□ 0.98
SHANK2Q9UPX8 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC21.16■□□□□ 0.98
SHANK2Q9UPX8 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC21.16■□□□□ 0.98
SHANK2Q9UPX8 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SHANK2Q9UPX8 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC21.16■□□□□ 0.98
SHANK2Q9UPX8 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC21.16■□□□□ 0.98
SHANK2Q9UPX8 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SHANK2Q9UPX8 FAM32A-204ENST00000588367 798 ntTSL 2 BASIC21.16■□□□□ 0.98
SHANK2Q9UPX8 AC010504.1-201ENST00000591311 585 ntTSL 3 BASIC21.16■□□□□ 0.98
SHANK2Q9UPX8 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SHANK2Q9UPX8 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC21.16■□□□□ 0.98
SHANK2Q9UPX8 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
SHANK2Q9UPX8 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC21.16■□□□□ 0.98
SHANK2Q9UPX8 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SHANK2Q9UPX8 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC21.16■□□□□ 0.98
SHANK2Q9UPX8 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC21.16■□□□□ 0.98
SHANK2Q9UPX8 AC068760.1-201ENST00000493579 1953 ntBASIC21.16■□□□□ 0.98
SHANK2Q9UPX8 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC21.16■□□□□ 0.98
SHANK2Q9UPX8 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
SHANK2Q9UPX8 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
SHANK2Q9UPX8 AL139158.3-201ENST00000641212 1562 ntBASIC21.15■□□□□ 0.98
SHANK2Q9UPX8 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SHANK2Q9UPX8 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
SHANK2Q9UPX8 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC21.15■□□□□ 0.98
SHANK2Q9UPX8 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SHANK2Q9UPX8 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
SHANK2Q9UPX8 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SHANK2Q9UPX8 KRT18P62-201ENST00000446618 1287 ntBASIC21.15■□□□□ 0.98
SHANK2Q9UPX8 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SHANK2Q9UPX8 VENTXP3-201ENST00000546480 773 ntBASIC21.15■□□□□ 0.98
SHANK2Q9UPX8 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC21.15■□□□□ 0.98
SHANK2Q9UPX8 ARPP19-206ENST00000564163 718 ntTSL 2 BASIC21.15■□□□□ 0.98
SHANK2Q9UPX8 AL592295.3-201ENST00000637155 863 ntTSL 5 BASIC21.15■□□□□ 0.98
SHANK2Q9UPX8 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
SHANK2Q9UPX8 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SHANK2Q9UPX8 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
SHANK2Q9UPX8 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC21.15■□□□□ 0.98
SHANK2Q9UPX8 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
SHANK2Q9UPX8 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SHANK2Q9UPX8 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC21.15■□□□□ 0.98
SHANK2Q9UPX8 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SHANK2Q9UPX8 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC21.15■□□□□ 0.98
SHANK2Q9UPX8 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC21.15■□□□□ 0.98
SHANK2Q9UPX8 PROK2-201ENST00000295619 1022 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
SHANK2Q9UPX8 UROS-201ENST00000368774 744 ntTSL 2 BASIC21.14■□□□□ 0.98
SHANK2Q9UPX8 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
SHANK2Q9UPX8 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
SHANK2Q9UPX8 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
SHANK2Q9UPX8 LINC01056-201ENST00000455711 1234 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
SHANK2Q9UPX8 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SHANK2Q9UPX8 PAQR9-AS1-203ENST00000497652 516 ntTSL 3 BASIC21.14■□□□□ 0.98
SHANK2Q9UPX8 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC21.14■□□□□ 0.98
SHANK2Q9UPX8 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC21.14■□□□□ 0.98
SHANK2Q9UPX8 AL049840.2-201ENST00000602722 535 ntBASIC21.14■□□□□ 0.98
SHANK2Q9UPX8 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
SHANK2Q9UPX8 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC21.14■□□□□ 0.98
SHANK2Q9UPX8 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SHANK2Q9UPX8 AC015909.5-201ENST00000624336 2266 ntBASIC21.14■□□□□ 0.97
SHANK2Q9UPX8 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SHANK2Q9UPX8 AC021305.1-201ENST00000520656 1514 ntBASIC21.14■□□□□ 0.97
SHANK2Q9UPX8 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SHANK2Q9UPX8 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC21.14■□□□□ 0.97
SHANK2Q9UPX8 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC21.14■□□□□ 0.97
SHANK2Q9UPX8 ADK-205ENST00000539909 1866 ntTSL 2 BASIC21.14■□□□□ 0.97
SHANK2Q9UPX8 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC21.14■□□□□ 0.97
SHANK2Q9UPX8 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
SHANK2Q9UPX8 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
SHANK2Q9UPX8 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
SHANK2Q9UPX8 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC21.13■□□□□ 0.97
SHANK2Q9UPX8 AQP7P5-201ENST00000428759 1049 ntBASIC21.13■□□□□ 0.97
SHANK2Q9UPX8 KRT18P46-201ENST00000435568 1279 ntBASIC21.13■□□□□ 0.97
SHANK2Q9UPX8 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC21.13■□□□□ 0.97
SHANK2Q9UPX8 AQP7P4-201ENST00000447083 1042 ntBASIC21.13■□□□□ 0.97
SHANK2Q9UPX8 AQP7P2-201ENST00000453967 1041 ntBASIC21.13■□□□□ 0.97
SHANK2Q9UPX8 STK24P1-201ENST00000455035 1291 ntBASIC21.13■□□□□ 0.97
SHANK2Q9UPX8 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC21.13■□□□□ 0.97
SHANK2Q9UPX8 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC21.13■□□□□ 0.97
SHANK2Q9UPX8 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC21.13■□□□□ 0.97
SHANK2Q9UPX8 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC21.13■□□□□ 0.97
SHANK2Q9UPX8 KRT18P37-201ENST00000520711 1282 ntBASIC21.13■□□□□ 0.97
SHANK2Q9UPX8 DLK1-205ENST00000556051 469 ntTSL 2 BASIC21.13■□□□□ 0.97
SHANK2Q9UPX8 AL009176.1-201ENST00000607876 650 ntBASIC21.13■□□□□ 0.97
SHANK2Q9UPX8 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
SHANK2Q9UPX8 AQP7P3-201ENST00000624547 1041 ntBASIC21.13■□□□□ 0.97
SHANK2Q9UPX8 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SHANK2Q9UPX8 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC21.13■□□□□ 0.97
SHANK2Q9UPX8 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SHANK2Q9UPX8 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SHANK2Q9UPX8 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SHANK2Q9UPX8 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
SHANK2Q9UPX8 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
SHANK2Q9UPX8 AC138761.6-201ENST00000583997 1423 ntBASIC21.13■□□□□ 0.97
SHANK2Q9UPX8 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
SHANK2Q9UPX8 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC21.13■□□□□ 0.97
SHANK2Q9UPX8 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
SHANK2Q9UPX8 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
SHANK2Q9UPX8 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SHANK2Q9UPX8 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SHANK2Q9UPX8 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms