Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CTSFQ9UBX1 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
CTSFQ9UBX1 TMBIM7P-202ENST00000641474 1516 ntBASIC13.81□□□□□ -0.2
CTSFQ9UBX1 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CTSFQ9UBX1 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CTSFQ9UBX1 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
CTSFQ9UBX1 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
CTSFQ9UBX1 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CTSFQ9UBX1 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CTSFQ9UBX1 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
CTSFQ9UBX1 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CTSFQ9UBX1 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC13.81□□□□□ -0.2
CTSFQ9UBX1 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC13.81□□□□□ -0.2
CTSFQ9UBX1 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC13.81□□□□□ -0.2
CTSFQ9UBX1 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC13.81□□□□□ -0.2
CTSFQ9UBX1 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC13.81□□□□□ -0.2
CTSFQ9UBX1 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CTSFQ9UBX1 RBM8B-201ENST00000555532 525 ntBASIC13.81□□□□□ -0.2
CTSFQ9UBX1 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC13.81□□□□□ -0.2
CTSFQ9UBX1 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.81□□□□□ -0.2
CTSFQ9UBX1 RN7SL774P-201ENST00000577467 290 ntBASIC13.81□□□□□ -0.2
CTSFQ9UBX1 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
CTSFQ9UBX1 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CTSFQ9UBX1 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC13.81□□□□□ -0.2
CTSFQ9UBX1 AC100757.4-201ENST00000626934 759 ntBASIC13.81□□□□□ -0.2
CTSFQ9UBX1 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC13.81□□□□□ -0.2
CTSFQ9UBX1 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CTSFQ9UBX1 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CTSFQ9UBX1 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
CTSFQ9UBX1 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
CTSFQ9UBX1 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.81□□□□□ -0.2
CTSFQ9UBX1 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.81□□□□□ -0.2
CTSFQ9UBX1 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
CTSFQ9UBX1 AC144522.1-201ENST00000625111 1658 ntBASIC13.81□□□□□ -0.2
CTSFQ9UBX1 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CTSFQ9UBX1 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.81□□□□□ -0.2
CTSFQ9UBX1 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CTSFQ9UBX1 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CTSFQ9UBX1 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC13.81□□□□□ -0.2
CTSFQ9UBX1 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CTSFQ9UBX1 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CTSFQ9UBX1 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.8□□□□□ -0.2
CTSFQ9UBX1 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CTSFQ9UBX1 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC13.8□□□□□ -0.2
CTSFQ9UBX1 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CTSFQ9UBX1 CYP4F23P-201ENST00000593402 1579 ntBASIC13.8□□□□□ -0.2
CTSFQ9UBX1 MTHFR-210ENST00000641407 2387 ntBASIC13.8□□□□□ -0.2
CTSFQ9UBX1 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC13.8□□□□□ -0.2
CTSFQ9UBX1 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC13.8□□□□□ -0.2
CTSFQ9UBX1 AC015688.4-201ENST00000580780 1647 ntBASIC13.8□□□□□ -0.2
CTSFQ9UBX1 FGD5P1-202ENST00000614866 2498 ntBASIC13.8□□□□□ -0.2
CTSFQ9UBX1 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC13.8□□□□□ -0.2
CTSFQ9UBX1 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
CTSFQ9UBX1 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC13.8□□□□□ -0.2
CTSFQ9UBX1 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC13.8□□□□□ -0.2
CTSFQ9UBX1 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC13.8□□□□□ -0.2
CTSFQ9UBX1 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC13.8□□□□□ -0.2
CTSFQ9UBX1 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
CTSFQ9UBX1 AL662890.1-201ENST00000396818 632 ntBASIC13.8□□□□□ -0.2
CTSFQ9UBX1 HNRNPA1P41-201ENST00000397777 928 ntBASIC13.8□□□□□ -0.2
CTSFQ9UBX1 AL008707.1-201ENST00000422498 534 ntBASIC13.8□□□□□ -0.2
CTSFQ9UBX1 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC13.8□□□□□ -0.2
CTSFQ9UBX1 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CTSFQ9UBX1 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC13.8□□□□□ -0.2
CTSFQ9UBX1 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC13.8□□□□□ -0.2
CTSFQ9UBX1 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC13.8□□□□□ -0.2
CTSFQ9UBX1 FADS2-212ENST00000522639 360 ntTSL 5 BASIC13.8□□□□□ -0.2
CTSFQ9UBX1 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
CTSFQ9UBX1 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
CTSFQ9UBX1 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC13.8□□□□□ -0.2
CTSFQ9UBX1 FADS2-215ENST00000574708 385 ntTSL 3 BASIC13.8□□□□□ -0.2
CTSFQ9UBX1 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CTSFQ9UBX1 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CTSFQ9UBX1 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CTSFQ9UBX1 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.8□□□□□ -0.2
CTSFQ9UBX1 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CTSFQ9UBX1 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CTSFQ9UBX1 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CTSFQ9UBX1 AC008132.1-202ENST00000342005 1389 ntBASIC13.8□□□□□ -0.2
CTSFQ9UBX1 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CTSFQ9UBX1 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CTSFQ9UBX1 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CTSFQ9UBX1 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.8□□□□□ -0.2
CTSFQ9UBX1 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CTSFQ9UBX1 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CTSFQ9UBX1 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CTSFQ9UBX1 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CTSFQ9UBX1 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CTSFQ9UBX1 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CTSFQ9UBX1 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CTSFQ9UBX1 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CTSFQ9UBX1 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CTSFQ9UBX1 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CTSFQ9UBX1 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CTSFQ9UBX1 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CTSFQ9UBX1 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13.79□□□□□ -0.2
CTSFQ9UBX1 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CTSFQ9UBX1 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC13.79□□□□□ -0.2
CTSFQ9UBX1 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
CTSFQ9UBX1 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms