Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SLC52A1Q9NWF4 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SLC52A1Q9NWF4 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
SLC52A1Q9NWF4 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
SLC52A1Q9NWF4 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SLC52A1Q9NWF4 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
SLC52A1Q9NWF4 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
SLC52A1Q9NWF4 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
SLC52A1Q9NWF4 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC20.48■□□□□ 0.87
SLC52A1Q9NWF4 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
SLC52A1Q9NWF4 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC52A1Q9NWF4 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC52A1Q9NWF4 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
SLC52A1Q9NWF4 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC52A1Q9NWF4 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
SLC52A1Q9NWF4 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC20.48■□□□□ 0.87
SLC52A1Q9NWF4 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC52A1Q9NWF4 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SLC52A1Q9NWF4 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
SLC52A1Q9NWF4 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC52A1Q9NWF4 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
SLC52A1Q9NWF4 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC52A1Q9NWF4 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC52A1Q9NWF4 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC52A1Q9NWF4 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC20.48■□□□□ 0.87
SLC52A1Q9NWF4 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SLC52A1Q9NWF4 AC103592.1-201ENST00000394513 664 ntBASIC20.48■□□□□ 0.87
SLC52A1Q9NWF4 AC073210.1-201ENST00000414799 232 ntBASIC20.48■□□□□ 0.87
SLC52A1Q9NWF4 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SLC52A1Q9NWF4 GALP-202ENST00000440823 889 ntTSL 5 BASIC20.48■□□□□ 0.87
SLC52A1Q9NWF4 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC52A1Q9NWF4 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC52A1Q9NWF4 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC20.48■□□□□ 0.87
SLC52A1Q9NWF4 RN7SKP155-201ENST00000516031 288 ntBASIC20.48■□□□□ 0.87
SLC52A1Q9NWF4 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC20.48■□□□□ 0.87
SLC52A1Q9NWF4 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC20.48■□□□□ 0.87
SLC52A1Q9NWF4 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC20.48■□□□□ 0.87
SLC52A1Q9NWF4 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SLC52A1Q9NWF4 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC20.48■□□□□ 0.87
SLC52A1Q9NWF4 AP000769.1-203ENST00000637245 208 ntBASIC20.48■□□□□ 0.87
SLC52A1Q9NWF4 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC52A1Q9NWF4 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC52A1Q9NWF4 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC20.48■□□□□ 0.87
SLC52A1Q9NWF4 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SLC52A1Q9NWF4 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SLC52A1Q9NWF4 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC52A1Q9NWF4 KRT8P43-201ENST00000406052 1458 ntBASIC20.48■□□□□ 0.87
SLC52A1Q9NWF4 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SLC52A1Q9NWF4 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
SLC52A1Q9NWF4 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SLC52A1Q9NWF4 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC52A1Q9NWF4 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SLC52A1Q9NWF4 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
SLC52A1Q9NWF4 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC52A1Q9NWF4 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
SLC52A1Q9NWF4 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SLC52A1Q9NWF4 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SLC52A1Q9NWF4 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
SLC52A1Q9NWF4 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SLC52A1Q9NWF4 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SLC52A1Q9NWF4 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SLC52A1Q9NWF4 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SLC52A1Q9NWF4 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SLC52A1Q9NWF4 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SLC52A1Q9NWF4 AC018529.2-202ENST00000611482 3087 ntBASIC20.47■□□□□ 0.87
SLC52A1Q9NWF4 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SLC52A1Q9NWF4 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SLC52A1Q9NWF4 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC20.47■□□□□ 0.87
SLC52A1Q9NWF4 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SLC52A1Q9NWF4 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SLC52A1Q9NWF4 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC20.47■□□□□ 0.87
SLC52A1Q9NWF4 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC20.47■□□□□ 0.87
SLC52A1Q9NWF4 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC20.47■□□□□ 0.87
SLC52A1Q9NWF4 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
SLC52A1Q9NWF4 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC20.47■□□□□ 0.87
SLC52A1Q9NWF4 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SLC52A1Q9NWF4 ASS1P2-201ENST00000439895 1223 ntBASIC20.47■□□□□ 0.87
SLC52A1Q9NWF4 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC20.47■□□□□ 0.87
SLC52A1Q9NWF4 STK24P1-201ENST00000455035 1291 ntBASIC20.47■□□□□ 0.87
SLC52A1Q9NWF4 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC20.47■□□□□ 0.87
SLC52A1Q9NWF4 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC20.47■□□□□ 0.87
SLC52A1Q9NWF4 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
SLC52A1Q9NWF4 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC20.47■□□□□ 0.87
SLC52A1Q9NWF4 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC20.47■□□□□ 0.87
SLC52A1Q9NWF4 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SLC52A1Q9NWF4 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SLC52A1Q9NWF4 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
SLC52A1Q9NWF4 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SLC52A1Q9NWF4 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC20.47■□□□□ 0.87
SLC52A1Q9NWF4 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
SLC52A1Q9NWF4 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SLC52A1Q9NWF4 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC20.47■□□□□ 0.87
SLC52A1Q9NWF4 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC52A1Q9NWF4 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC52A1Q9NWF4 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
SLC52A1Q9NWF4 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC52A1Q9NWF4 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC52A1Q9NWF4 AC138761.6-201ENST00000583997 1423 ntBASIC20.46■□□□□ 0.87
SLC52A1Q9NWF4 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC20.46■□□□□ 0.87
SLC52A1Q9NWF4 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms