Protein–RNA interactions for Protein: Q6VB84

FOXD4L3, Forkhead box protein D4-like 3, humanhuman

Predicted RBP Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD4L3Q6VB84 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
FOXD4L3Q6VB84 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
FOXD4L3Q6VB84 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
FOXD4L3Q6VB84 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
FOXD4L3Q6VB84 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
FOXD4L3Q6VB84 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC17.25■□□□□ 0.35
FOXD4L3Q6VB84 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
FOXD4L3Q6VB84 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC17.25■□□□□ 0.35
FOXD4L3Q6VB84 AC015688.4-201ENST00000580780 1647 ntBASIC17.25■□□□□ 0.35
FOXD4L3Q6VB84 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC17.25■□□□□ 0.35
FOXD4L3Q6VB84 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
FOXD4L3Q6VB84 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
FOXD4L3Q6VB84 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
FOXD4L3Q6VB84 AL445209.1-201ENST00000607269 3491 ntBASIC17.24■□□□□ 0.35
FOXD4L3Q6VB84 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
FOXD4L3Q6VB84 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
FOXD4L3Q6VB84 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
FOXD4L3Q6VB84 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
FOXD4L3Q6VB84 PEG13-201ENST00000631594 5667 ntBASIC17.24■□□□□ 0.35
FOXD4L3Q6VB84 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
FOXD4L3Q6VB84 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
FOXD4L3Q6VB84 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
FOXD4L3Q6VB84 AC215219.1-201ENST00000400706 1817 ntBASIC17.24■□□□□ 0.35
FOXD4L3Q6VB84 KRT8P22-201ENST00000562317 1415 ntBASIC17.24■□□□□ 0.35
FOXD4L3Q6VB84 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
FOXD4L3Q6VB84 C1QBPP1-201ENST00000400117 770 ntBASIC17.24■□□□□ 0.35
FOXD4L3Q6VB84 AC134915.1-201ENST00000426461 574 ntBASIC17.24■□□□□ 0.35
FOXD4L3Q6VB84 EIF3FP3-201ENST00000434851 1086 ntBASIC17.24■□□□□ 0.35
FOXD4L3Q6VB84 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
FOXD4L3Q6VB84 URGCP-206ENST00000446958 365 ntTSL 2 BASIC17.24■□□□□ 0.35
FOXD4L3Q6VB84 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
FOXD4L3Q6VB84 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC17.24■□□□□ 0.35
FOXD4L3Q6VB84 AC093214.1-201ENST00000511688 1107 ntBASIC17.24■□□□□ 0.35
FOXD4L3Q6VB84 GLI4-203ENST00000517468 963 ntTSL 5 BASIC17.24■□□□□ 0.35
FOXD4L3Q6VB84 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC17.24■□□□□ 0.35
FOXD4L3Q6VB84 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
FOXD4L3Q6VB84 AL359711.2-201ENST00000563105 872 ntBASIC17.24■□□□□ 0.35
FOXD4L3Q6VB84 BRI3BPP1-201ENST00000594224 787 ntBASIC17.24■□□□□ 0.35
FOXD4L3Q6VB84 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC17.24■□□□□ 0.35
FOXD4L3Q6VB84 AC007431.3-201ENST00000623221 587 ntBASIC17.24■□□□□ 0.35
FOXD4L3Q6VB84 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC17.24■□□□□ 0.35
FOXD4L3Q6VB84 AMT-232ENST00000636199 1546 ntTSL 5 BASIC17.24■□□□□ 0.35
FOXD4L3Q6VB84 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC17.24■□□□□ 0.35
FOXD4L3Q6VB84 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
FOXD4L3Q6VB84 AC005252.3-201ENST00000623855 2258 ntBASIC17.24■□□□□ 0.35
FOXD4L3Q6VB84 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
FOXD4L3Q6VB84 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
FOXD4L3Q6VB84 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
FOXD4L3Q6VB84 MYADML-201ENST00000474610 2147 ntBASIC17.24■□□□□ 0.35
FOXD4L3Q6VB84 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC17.24■□□□□ 0.35
FOXD4L3Q6VB84 DMBT1P1-203ENST00000636837 4628 ntBASIC17.24■□□□□ 0.35
FOXD4L3Q6VB84 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
FOXD4L3Q6VB84 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
FOXD4L3Q6VB84 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
FOXD4L3Q6VB84 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC17.24■□□□□ 0.35
FOXD4L3Q6VB84 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
FOXD4L3Q6VB84 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
FOXD4L3Q6VB84 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
FOXD4L3Q6VB84 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
FOXD4L3Q6VB84 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC17.24■□□□□ 0.35
FOXD4L3Q6VB84 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC17.23■□□□□ 0.35
FOXD4L3Q6VB84 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC17.23■□□□□ 0.35
FOXD4L3Q6VB84 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
FOXD4L3Q6VB84 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC17.23■□□□□ 0.35
FOXD4L3Q6VB84 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
FOXD4L3Q6VB84 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
FOXD4L3Q6VB84 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
FOXD4L3Q6VB84 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
FOXD4L3Q6VB84 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC17.23■□□□□ 0.35
FOXD4L3Q6VB84 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
FOXD4L3Q6VB84 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
FOXD4L3Q6VB84 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
FOXD4L3Q6VB84 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
FOXD4L3Q6VB84 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
FOXD4L3Q6VB84 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC17.23■□□□□ 0.35
FOXD4L3Q6VB84 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
FOXD4L3Q6VB84 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC17.23■□□□□ 0.35
FOXD4L3Q6VB84 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC17.23■□□□□ 0.35
FOXD4L3Q6VB84 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
FOXD4L3Q6VB84 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC17.23■□□□□ 0.35
FOXD4L3Q6VB84 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC17.23■□□□□ 0.35
FOXD4L3Q6VB84 CD81-207ENST00000481687 890 ntTSL 2 BASIC17.23■□□□□ 0.35
FOXD4L3Q6VB84 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC17.23■□□□□ 0.35
FOXD4L3Q6VB84 AC022616.1-201ENST00000518688 554 ntBASIC17.23■□□□□ 0.35
FOXD4L3Q6VB84 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC17.23■□□□□ 0.35
FOXD4L3Q6VB84 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC17.23■□□□□ 0.35
FOXD4L3Q6VB84 AC138761.1-201ENST00000584393 385 ntBASIC17.23■□□□□ 0.35
FOXD4L3Q6VB84 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC17.23■□□□□ 0.35
FOXD4L3Q6VB84 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
FOXD4L3Q6VB84 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC17.23■□□□□ 0.35
FOXD4L3Q6VB84 PRSS30P-206ENST00000641773 873 ntBASIC17.23■□□□□ 0.35
FOXD4L3Q6VB84 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC17.23■□□□□ 0.35
FOXD4L3Q6VB84 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
FOXD4L3Q6VB84 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
FOXD4L3Q6VB84 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
FOXD4L3Q6VB84 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC17.23■□□□□ 0.35
FOXD4L3Q6VB84 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
FOXD4L3Q6VB84 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
FOXD4L3Q6VB84 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC17.23■□□□□ 0.35
FOXD4L3Q6VB84 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms