Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
TTC39BQ5VTQ0 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC15.33■□□□□ 0.04
TTC39BQ5VTQ0 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TTC39BQ5VTQ0 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TTC39BQ5VTQ0 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
TTC39BQ5VTQ0 AC152010.1-201ENST00000415779 2006 ntBASIC15.33■□□□□ 0.04
TTC39BQ5VTQ0 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC15.32■□□□□ 0.04
TTC39BQ5VTQ0 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TTC39BQ5VTQ0 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC15.32■□□□□ 0.04
TTC39BQ5VTQ0 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
TTC39BQ5VTQ0 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TTC39BQ5VTQ0 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
TTC39BQ5VTQ0 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
TTC39BQ5VTQ0 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC15.32■□□□□ 0.04
TTC39BQ5VTQ0 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
TTC39BQ5VTQ0 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TTC39BQ5VTQ0 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TTC39BQ5VTQ0 AC020910.5-201ENST00000623668 1865 ntBASIC15.32■□□□□ 0.04
TTC39BQ5VTQ0 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TTC39BQ5VTQ0 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
TTC39BQ5VTQ0 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TTC39BQ5VTQ0 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TTC39BQ5VTQ0 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TTC39BQ5VTQ0 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TTC39BQ5VTQ0 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
TTC39BQ5VTQ0 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TTC39BQ5VTQ0 TISP43-201ENST00000409793 538 ntTSL 4 BASIC15.32■□□□□ 0.04
TTC39BQ5VTQ0 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC15.32■□□□□ 0.04
TTC39BQ5VTQ0 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TTC39BQ5VTQ0 GOLGA2P4-201ENST00000441462 777 ntBASIC15.32■□□□□ 0.04
TTC39BQ5VTQ0 ATP6V0CP2-201ENST00000469409 207 ntBASIC15.32■□□□□ 0.04
TTC39BQ5VTQ0 RPSAP36-202ENST00000494591 1261 ntBASIC15.32■□□□□ 0.04
TTC39BQ5VTQ0 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
TTC39BQ5VTQ0 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC15.32■□□□□ 0.04
TTC39BQ5VTQ0 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
TTC39BQ5VTQ0 MIR4683-201ENST00000579659 81 ntBASIC15.32■□□□□ 0.04
TTC39BQ5VTQ0 RN7SL219P-201ENST00000582872 296 ntBASIC15.32■□□□□ 0.04
TTC39BQ5VTQ0 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC15.32■□□□□ 0.04
TTC39BQ5VTQ0 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TTC39BQ5VTQ0 AL358472.3-201ENST00000608147 415 ntBASIC15.32■□□□□ 0.04
TTC39BQ5VTQ0 DIO1-215ENST00000610607 796 ntTSL 5 BASIC15.32■□□□□ 0.04
TTC39BQ5VTQ0 AP001002.3-201ENST00000623482 206 ntBASIC15.32■□□□□ 0.04
TTC39BQ5VTQ0 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC15.32■□□□□ 0.04
TTC39BQ5VTQ0 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC15.32■□□□□ 0.04
TTC39BQ5VTQ0 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TTC39BQ5VTQ0 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC15.32■□□□□ 0.04
TTC39BQ5VTQ0 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TTC39BQ5VTQ0 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
TTC39BQ5VTQ0 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
TTC39BQ5VTQ0 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TTC39BQ5VTQ0 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TTC39BQ5VTQ0 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC15.32■□□□□ 0.04
TTC39BQ5VTQ0 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TTC39BQ5VTQ0 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TTC39BQ5VTQ0 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
TTC39BQ5VTQ0 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC15.32■□□□□ 0.04
TTC39BQ5VTQ0 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.32■□□□□ 0.04
TTC39BQ5VTQ0 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TTC39BQ5VTQ0 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TTC39BQ5VTQ0 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC15.31■□□□□ 0.04
TTC39BQ5VTQ0 AC092135.3-201ENST00000624151 1846 ntBASIC15.31■□□□□ 0.04
TTC39BQ5VTQ0 OS9-207ENST00000439210 1946 ntTSL 2 BASIC15.31■□□□□ 0.04
TTC39BQ5VTQ0 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TTC39BQ5VTQ0 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TTC39BQ5VTQ0 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TTC39BQ5VTQ0 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TTC39BQ5VTQ0 C1R-201ENST00000535233 2211 ntTSL 2 BASIC15.31■□□□□ 0.04
TTC39BQ5VTQ0 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
TTC39BQ5VTQ0 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TTC39BQ5VTQ0 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC15.31■□□□□ 0.04
TTC39BQ5VTQ0 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TTC39BQ5VTQ0 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TTC39BQ5VTQ0 RPS3-201ENST00000278572 907 ntTSL 3 BASIC15.31■□□□□ 0.04
TTC39BQ5VTQ0 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TTC39BQ5VTQ0 MIR326-201ENST00000362220 95 ntBASIC15.31■□□□□ 0.04
TTC39BQ5VTQ0 RBM38-204ENST00000371219 760 ntTSL 2 BASIC15.31■□□□□ 0.04
TTC39BQ5VTQ0 AC010141.1-201ENST00000411585 623 ntBASIC15.31■□□□□ 0.04
TTC39BQ5VTQ0 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC15.31■□□□□ 0.04
TTC39BQ5VTQ0 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TTC39BQ5VTQ0 HSPB1P2-201ENST00000448722 546 ntBASIC15.31■□□□□ 0.04
TTC39BQ5VTQ0 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TTC39BQ5VTQ0 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC15.31■□□□□ 0.04
TTC39BQ5VTQ0 APOA2-204ENST00000464492 530 ntTSL 3 BASIC15.31■□□□□ 0.04
TTC39BQ5VTQ0 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TTC39BQ5VTQ0 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC15.31■□□□□ 0.04
TTC39BQ5VTQ0 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC15.31■□□□□ 0.04
TTC39BQ5VTQ0 AGER-214ENST00000538695 487 ntTSL 2 BASIC15.31■□□□□ 0.04
TTC39BQ5VTQ0 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TTC39BQ5VTQ0 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC15.31■□□□□ 0.04
TTC39BQ5VTQ0 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC15.31■□□□□ 0.04
TTC39BQ5VTQ0 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC15.31■□□□□ 0.04
TTC39BQ5VTQ0 KLK3-211ENST00000597483 810 ntTSL 2 BASIC15.31■□□□□ 0.04
TTC39BQ5VTQ0 AC091271.1-201ENST00000611877 1162 ntBASIC15.31■□□□□ 0.04
TTC39BQ5VTQ0 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TTC39BQ5VTQ0 AL136301.1-201ENST00000615830 422 ntBASIC15.31■□□□□ 0.04
TTC39BQ5VTQ0 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TTC39BQ5VTQ0 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC15.31■□□□□ 0.04
TTC39BQ5VTQ0 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TTC39BQ5VTQ0 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TTC39BQ5VTQ0 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms