Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC9.47□□□□□ -0.89
VPS13DQ5THJ4 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
VPS13DQ5THJ4 AC000077.1-201ENST00000420012 953 ntBASIC9.47□□□□□ -0.89
VPS13DQ5THJ4 TPT1P6-201ENST00000458298 514 ntBASIC9.47□□□□□ -0.89
VPS13DQ5THJ4 RN7SL523P-201ENST00000484401 298 ntBASIC9.47□□□□□ -0.89
VPS13DQ5THJ4 RNA5SP420-201ENST00000516997 137 ntBASIC9.47□□□□□ -0.89
VPS13DQ5THJ4 AC091304.3-201ENST00000566500 716 ntBASIC9.47□□□□□ -0.89
VPS13DQ5THJ4 FXYD3-206ENST00000603524 742 ntTSL 3 BASIC9.47□□□□□ -0.89
VPS13DQ5THJ4 FXYD3-211ENST00000604804 564 ntTSL 4 BASIC9.47□□□□□ -0.89
VPS13DQ5THJ4 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
VPS13DQ5THJ4 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
VPS13DQ5THJ4 SUCLA2-205ENST00000470760 1445 ntTSL 2 BASIC9.47□□□□□ -0.89
VPS13DQ5THJ4 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC9.47□□□□□ -0.89
VPS13DQ5THJ4 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
VPS13DQ5THJ4 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC9.47□□□□□ -0.89
VPS13DQ5THJ4 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
VPS13DQ5THJ4 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
VPS13DQ5THJ4 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC9.47□□□□□ -0.89
VPS13DQ5THJ4 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
VPS13DQ5THJ4 COLQ-202ENST00000383786 1482 ntTSL 5 BASIC9.47□□□□□ -0.89
VPS13DQ5THJ4 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC9.47□□□□□ -0.89
VPS13DQ5THJ4 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC9.47□□□□□ -0.89
VPS13DQ5THJ4 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
VPS13DQ5THJ4 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
VPS13DQ5THJ4 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
VPS13DQ5THJ4 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC9.47□□□□□ -0.89
VPS13DQ5THJ4 CICP14-201ENST00000629111 2732 ntBASIC9.47□□□□□ -0.89
VPS13DQ5THJ4 ODF3L1-201ENST00000332145 1196 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
VPS13DQ5THJ4 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
VPS13DQ5THJ4 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC9.47□□□□□ -0.89
VPS13DQ5THJ4 RPL10-203ENST00000406022 748 ntTSL 3 BASIC9.47□□□□□ -0.89
VPS13DQ5THJ4 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC9.47□□□□□ -0.89
VPS13DQ5THJ4 TPT1P11-201ENST00000458482 498 ntBASIC9.47□□□□□ -0.89
VPS13DQ5THJ4 RN7SL173P-201ENST00000461853 292 ntBASIC9.47□□□□□ -0.89
VPS13DQ5THJ4 RN7SL578P-201ENST00000477781 283 ntBASIC9.47□□□□□ -0.89
VPS13DQ5THJ4 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC9.47□□□□□ -0.89
VPS13DQ5THJ4 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC9.47□□□□□ -0.89
VPS13DQ5THJ4 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC9.47□□□□□ -0.89
VPS13DQ5THJ4 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
VPS13DQ5THJ4 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC9.47□□□□□ -0.89
VPS13DQ5THJ4 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
VPS13DQ5THJ4 AC103702.1-201ENST00000548801 2630 ntBASIC9.47□□□□□ -0.89
VPS13DQ5THJ4 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
VPS13DQ5THJ4 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC9.47□□□□□ -0.89
VPS13DQ5THJ4 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC9.47□□□□□ -0.89
VPS13DQ5THJ4 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
VPS13DQ5THJ4 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC9.47□□□□□ -0.89
VPS13DQ5THJ4 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC9.47□□□□□ -0.89
VPS13DQ5THJ4 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
VPS13DQ5THJ4 AC022080.1-201ENST00000366255 781 ntBASIC9.47□□□□□ -0.89
VPS13DQ5THJ4 KRT8P30-201ENST00000432100 650 ntBASIC9.47□□□□□ -0.89
VPS13DQ5THJ4 PRR34-AS1-203ENST00000451166 877 ntTSL 3 BASIC9.47□□□□□ -0.89
VPS13DQ5THJ4 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC9.47□□□□□ -0.89
VPS13DQ5THJ4 AC010478.1-203ENST00000558403 532 ntTSL 4 BASIC9.47□□□□□ -0.89
VPS13DQ5THJ4 ANKRD26P1-203ENST00000569528 966 ntBASIC9.47□□□□□ -0.89
VPS13DQ5THJ4 AC004466.2-201ENST00000614749 516 ntBASIC9.47□□□□□ -0.89
VPS13DQ5THJ4 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
VPS13DQ5THJ4 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
VPS13DQ5THJ4 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
VPS13DQ5THJ4 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC9.46□□□□□ -0.89
VPS13DQ5THJ4 FES-204ENST00000414248 2327 ntTSL 2 BASIC9.46□□□□□ -0.89
VPS13DQ5THJ4 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC9.46□□□□□ -0.89
VPS13DQ5THJ4 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
VPS13DQ5THJ4 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
VPS13DQ5THJ4 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC9.46□□□□□ -0.89
VPS13DQ5THJ4 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
VPS13DQ5THJ4 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC9.46□□□□□ -0.89
VPS13DQ5THJ4 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
VPS13DQ5THJ4 AC022532.1-201ENST00000624563 1728 ntBASIC9.46□□□□□ -0.89
VPS13DQ5THJ4 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
VPS13DQ5THJ4 PHACTR1-203ENST00000379335 943 ntTSL 2 BASIC9.46□□□□□ -0.89
VPS13DQ5THJ4 MPV17-209ENST00000405983 859 ntTSL 5 BASIC9.46□□□□□ -0.89
VPS13DQ5THJ4 AL121949.3-201ENST00000406684 385 ntBASIC9.46□□□□□ -0.89
VPS13DQ5THJ4 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.89
VPS13DQ5THJ4 IGFL1-201ENST00000437936 769 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
VPS13DQ5THJ4 VDAC1P11-201ENST00000458323 852 ntBASIC9.46□□□□□ -0.89
VPS13DQ5THJ4 AP003040.1-201ENST00000532044 1024 ntBASIC9.46□□□□□ -0.89
VPS13DQ5THJ4 KF455155.1-201ENST00000604493 303 ntBASIC9.46□□□□□ -0.89
VPS13DQ5THJ4 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
VPS13DQ5THJ4 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
VPS13DQ5THJ4 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
VPS13DQ5THJ4 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC9.46□□□□□ -0.89
VPS13DQ5THJ4 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
VPS13DQ5THJ4 MUC1-207ENST00000368392 1032 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
VPS13DQ5THJ4 MUC1-208ENST00000368393 937 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
VPS13DQ5THJ4 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC9.46□□□□□ -0.9
VPS13DQ5THJ4 HNRNPA1P10-201ENST00000444945 962 ntBASIC9.46□□□□□ -0.9
VPS13DQ5THJ4 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
VPS13DQ5THJ4 IGKV1OR-2-201ENST00000457995 350 ntBASIC9.46□□□□□ -0.9
VPS13DQ5THJ4 MUC1-213ENST00000462215 1189 ntTSL 2 BASIC9.46□□□□□ -0.9
VPS13DQ5THJ4 AC008026.2-201ENST00000495438 348 ntBASIC9.46□□□□□ -0.9
VPS13DQ5THJ4 SMUG1-221ENST00000514196 553 ntTSL 4 BASIC9.46□□□□□ -0.9
VPS13DQ5THJ4 C1orf198-207ENST00000523410 1041 ntAPPRIS ALT2 TSL 2 BASIC9.46□□□□□ -0.9
VPS13DQ5THJ4 TIMM10-202ENST00000525158 530 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.9
VPS13DQ5THJ4 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
VPS13DQ5THJ4 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC9.46□□□□□ -0.9
VPS13DQ5THJ4 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
VPS13DQ5THJ4 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
VPS13DQ5THJ4 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
VPS13DQ5THJ4 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms