Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SHROOM1Q2M3G4 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SHROOM1Q2M3G4 MT3-203ENST00000565838 421 ntTSL 3 BASIC16.93■□□□□ 0.3
SHROOM1Q2M3G4 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC16.93■□□□□ 0.3
SHROOM1Q2M3G4 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
SHROOM1Q2M3G4 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.93■□□□□ 0.3
SHROOM1Q2M3G4 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC16.93■□□□□ 0.3
SHROOM1Q2M3G4 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SHROOM1Q2M3G4 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SHROOM1Q2M3G4 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SHROOM1Q2M3G4 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SHROOM1Q2M3G4 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SHROOM1Q2M3G4 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SHROOM1Q2M3G4 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
SHROOM1Q2M3G4 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SHROOM1Q2M3G4 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SHROOM1Q2M3G4 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SHROOM1Q2M3G4 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SHROOM1Q2M3G4 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SHROOM1Q2M3G4 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC16.92■□□□□ 0.3
SHROOM1Q2M3G4 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC16.92■□□□□ 0.3
SHROOM1Q2M3G4 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
SHROOM1Q2M3G4 GPI-205ENST00000586425 1799 ntTSL 5 BASIC16.92■□□□□ 0.3
SHROOM1Q2M3G4 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC16.92■□□□□ 0.3
SHROOM1Q2M3G4 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC16.92■□□□□ 0.3
SHROOM1Q2M3G4 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SHROOM1Q2M3G4 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
SHROOM1Q2M3G4 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SHROOM1Q2M3G4 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SHROOM1Q2M3G4 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SHROOM1Q2M3G4 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC16.92■□□□□ 0.3
SHROOM1Q2M3G4 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SHROOM1Q2M3G4 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
SHROOM1Q2M3G4 AL627389.1-201ENST00000413508 1182 ntBASIC16.92■□□□□ 0.3
SHROOM1Q2M3G4 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC16.92■□□□□ 0.3
SHROOM1Q2M3G4 AL592076.1-201ENST00000424448 303 ntBASIC16.92■□□□□ 0.3
SHROOM1Q2M3G4 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC16.92■□□□□ 0.3
SHROOM1Q2M3G4 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
SHROOM1Q2M3G4 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC16.92■□□□□ 0.3
SHROOM1Q2M3G4 ORAOV1P1-201ENST00000503108 395 ntBASIC16.92■□□□□ 0.3
SHROOM1Q2M3G4 AC114947.1-202ENST00000514136 344 ntBASIC16.92■□□□□ 0.3
SHROOM1Q2M3G4 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC16.92■□□□□ 0.3
SHROOM1Q2M3G4 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC16.92■□□□□ 0.3
SHROOM1Q2M3G4 POLD4-208ENST00000532830 904 ntTSL 3 BASIC16.92■□□□□ 0.3
SHROOM1Q2M3G4 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC16.92■□□□□ 0.3
SHROOM1Q2M3G4 MIR3180-2-201ENST00000581748 88 ntBASIC16.92■□□□□ 0.3
SHROOM1Q2M3G4 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
SHROOM1Q2M3G4 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC16.92■□□□□ 0.3
SHROOM1Q2M3G4 AC107464.3-201ENST00000609172 737 ntBASIC16.92■□□□□ 0.3
SHROOM1Q2M3G4 AC073911.3-201ENST00000624401 631 ntBASIC16.92■□□□□ 0.3
SHROOM1Q2M3G4 AL161773.1-201ENST00000624845 863 ntBASIC16.92■□□□□ 0.3
SHROOM1Q2M3G4 AC009145.4-201ENST00000625119 1294 ntBASIC16.92■□□□□ 0.3
SHROOM1Q2M3G4 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
SHROOM1Q2M3G4 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
SHROOM1Q2M3G4 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SHROOM1Q2M3G4 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC16.92■□□□□ 0.3
SHROOM1Q2M3G4 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SHROOM1Q2M3G4 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC16.92■□□□□ 0.3
SHROOM1Q2M3G4 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
SHROOM1Q2M3G4 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC16.92■□□□□ 0.3
SHROOM1Q2M3G4 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
SHROOM1Q2M3G4 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
SHROOM1Q2M3G4 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.92■□□□□ 0.3
SHROOM1Q2M3G4 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SHROOM1Q2M3G4 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
SHROOM1Q2M3G4 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.91■□□□□ 0.3
SHROOM1Q2M3G4 AC046158.3-201ENST00000624947 2558 ntBASIC16.91■□□□□ 0.3
SHROOM1Q2M3G4 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC16.91■□□□□ 0.3
SHROOM1Q2M3G4 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SHROOM1Q2M3G4 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.91■□□□□ 0.3
SHROOM1Q2M3G4 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SHROOM1Q2M3G4 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
SHROOM1Q2M3G4 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHROOM1Q2M3G4 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC16.91■□□□□ 0.3
SHROOM1Q2M3G4 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC16.91■□□□□ 0.3
SHROOM1Q2M3G4 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.91■□□□□ 0.3
SHROOM1Q2M3G4 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHROOM1Q2M3G4 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
SHROOM1Q2M3G4 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHROOM1Q2M3G4 AC011498.7-201ENST00000624986 2027 ntBASIC16.91■□□□□ 0.3
SHROOM1Q2M3G4 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
SHROOM1Q2M3G4 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHROOM1Q2M3G4 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHROOM1Q2M3G4 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
SHROOM1Q2M3G4 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
SHROOM1Q2M3G4 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
SHROOM1Q2M3G4 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
SHROOM1Q2M3G4 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHROOM1Q2M3G4 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
SHROOM1Q2M3G4 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
SHROOM1Q2M3G4 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC16.91■□□□□ 0.3
SHROOM1Q2M3G4 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC16.91■□□□□ 0.3
SHROOM1Q2M3G4 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SHROOM1Q2M3G4 AC095040.1-201ENST00000513286 675 ntBASIC16.91■□□□□ 0.3
SHROOM1Q2M3G4 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
SHROOM1Q2M3G4 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC16.91■□□□□ 0.3
SHROOM1Q2M3G4 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC16.91■□□□□ 0.3
SHROOM1Q2M3G4 MIR4649-201ENST00000582839 64 ntBASIC16.91■□□□□ 0.3
SHROOM1Q2M3G4 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SHROOM1Q2M3G4 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms