Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RSPO4Q2I0M5 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RSPO4Q2I0M5 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
RSPO4Q2I0M5 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RSPO4Q2I0M5 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RSPO4Q2I0M5 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RSPO4Q2I0M5 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RSPO4Q2I0M5 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RSPO4Q2I0M5 FCRL6-202ENST00000339348 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RSPO4Q2I0M5 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RSPO4Q2I0M5 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RSPO4Q2I0M5 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RSPO4Q2I0M5 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC14.05□□□□□ -0.16
RSPO4Q2I0M5 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
RSPO4Q2I0M5 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RSPO4Q2I0M5 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
RSPO4Q2I0M5 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RSPO4Q2I0M5 CICP13-201ENST00000422015 2789 ntBASIC14.05□□□□□ -0.16
RSPO4Q2I0M5 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
RSPO4Q2I0M5 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RSPO4Q2I0M5 FER1L4-210ENST00000615531 5998 ntBASIC14.05□□□□□ -0.16
RSPO4Q2I0M5 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RSPO4Q2I0M5 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.04□□□□□ -0.16
RSPO4Q2I0M5 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RSPO4Q2I0M5 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
RSPO4Q2I0M5 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.04□□□□□ -0.16
RSPO4Q2I0M5 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
RSPO4Q2I0M5 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
RSPO4Q2I0M5 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
RSPO4Q2I0M5 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RSPO4Q2I0M5 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.04□□□□□ -0.16
RSPO4Q2I0M5 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
RSPO4Q2I0M5 TOMM5-203ENST00000401811 789 ntTSL 2 BASIC14.04□□□□□ -0.16
RSPO4Q2I0M5 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC14.04□□□□□ -0.16
RSPO4Q2I0M5 TXNL4B-203ENST00000426362 965 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
RSPO4Q2I0M5 AC104961.1-201ENST00000427605 771 ntBASIC14.04□□□□□ -0.16
RSPO4Q2I0M5 CDCA4P4-201ENST00000435216 680 ntBASIC14.04□□□□□ -0.16
RSPO4Q2I0M5 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC14.04□□□□□ -0.16
RSPO4Q2I0M5 SCARNA12-201ENST00000459155 270 ntBASIC14.04□□□□□ -0.16
RSPO4Q2I0M5 AC092896.1-201ENST00000465850 380 ntBASIC14.04□□□□□ -0.16
RSPO4Q2I0M5 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
RSPO4Q2I0M5 RN7SL277P-201ENST00000481521 288 ntBASIC14.04□□□□□ -0.16
RSPO4Q2I0M5 AC090820.1-201ENST00000519722 591 ntBASIC14.04□□□□□ -0.16
RSPO4Q2I0M5 CTB-178M22.2-201ENST00000519795 503 ntTSL 4 BASIC14.04□□□□□ -0.16
RSPO4Q2I0M5 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC14.04□□□□□ -0.16
RSPO4Q2I0M5 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
RSPO4Q2I0M5 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
RSPO4Q2I0M5 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC14.04□□□□□ -0.16
RSPO4Q2I0M5 AC073896.4-201ENST00000553176 403 ntTSL 2 BASIC14.04□□□□□ -0.16
RSPO4Q2I0M5 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC14.04□□□□□ -0.16
RSPO4Q2I0M5 MT2A-202ENST00000561491 581 ntTSL 2 BASIC14.04□□□□□ -0.16
RSPO4Q2I0M5 AC004231.3-201ENST00000579136 258 ntTSL 3 BASIC14.04□□□□□ -0.16
RSPO4Q2I0M5 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC14.04□□□□□ -0.16
RSPO4Q2I0M5 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.04□□□□□ -0.16
RSPO4Q2I0M5 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RSPO4Q2I0M5 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RSPO4Q2I0M5 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC14.04□□□□□ -0.16
RSPO4Q2I0M5 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC14.04□□□□□ -0.16
RSPO4Q2I0M5 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RSPO4Q2I0M5 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
RSPO4Q2I0M5 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RSPO4Q2I0M5 AC003102.2-201ENST00000589195 1469 ntBASIC14.04□□□□□ -0.16
RSPO4Q2I0M5 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RSPO4Q2I0M5 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC14.04□□□□□ -0.16
RSPO4Q2I0M5 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RSPO4Q2I0M5 AC092850.2-201ENST00000623821 2697 ntBASIC14.04□□□□□ -0.16
RSPO4Q2I0M5 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
RSPO4Q2I0M5 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RSPO4Q2I0M5 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
RSPO4Q2I0M5 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RSPO4Q2I0M5 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
RSPO4Q2I0M5 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RSPO4Q2I0M5 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RSPO4Q2I0M5 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.04□□□□□ -0.16
RSPO4Q2I0M5 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RSPO4Q2I0M5 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RSPO4Q2I0M5 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RSPO4Q2I0M5 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RSPO4Q2I0M5 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RSPO4Q2I0M5 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RSPO4Q2I0M5 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
RSPO4Q2I0M5 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC14.03□□□□□ -0.16
RSPO4Q2I0M5 SNORA57-201ENST00000383870 149 ntBASIC14.03□□□□□ -0.16
RSPO4Q2I0M5 MYL4-202ENST00000393450 855 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RSPO4Q2I0M5 RPL5P21-201ENST00000404620 815 ntBASIC14.03□□□□□ -0.16
RSPO4Q2I0M5 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
RSPO4Q2I0M5 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC14.03□□□□□ -0.16
RSPO4Q2I0M5 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RSPO4Q2I0M5 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC14.03□□□□□ -0.16
RSPO4Q2I0M5 PGAP2-207ENST00000463452 931 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
RSPO4Q2I0M5 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC14.03□□□□□ -0.16
RSPO4Q2I0M5 RPS23-207ENST00000511844 530 ntTSL 2 BASIC14.03□□□□□ -0.16
RSPO4Q2I0M5 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC14.03□□□□□ -0.16
RSPO4Q2I0M5 FOXN3-AS2-201ENST00000554071 1262 ntBASIC14.03□□□□□ -0.16
RSPO4Q2I0M5 DIO3OS-211ENST00000557532 712 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RSPO4Q2I0M5 SRP14-208ENST00000560773 468 ntTSL 3 BASIC14.03□□□□□ -0.16
RSPO4Q2I0M5 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC14.03□□□□□ -0.16
RSPO4Q2I0M5 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
RSPO4Q2I0M5 SIGLEC6-204ENST00000391797 1391 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RSPO4Q2I0M5 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms