Protein–RNA interactions for Protein: Q00975

CACNA1B, Voltage-dependent N-type calcium channel subunit alpha-1B, humanhuman

Predictions only

Length 2,339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1BQ00975 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CACNA1BQ00975 NANOS3-201ENST00000339133 581 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CACNA1BQ00975 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CACNA1BQ00975 SSR4P1-201ENST00000415143 412 ntBASIC13.36□□□□□ -0.27
CACNA1BQ00975 AL355500.1-201ENST00000439421 297 ntTSL 3 BASIC13.36□□□□□ -0.27
CACNA1BQ00975 WWC2-208ENST00000508747 1216 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CACNA1BQ00975 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC13.36□□□□□ -0.27
CACNA1BQ00975 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC13.36□□□□□ -0.27
CACNA1BQ00975 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC13.36□□□□□ -0.27
CACNA1BQ00975 AL049840.2-201ENST00000602722 535 ntBASIC13.36□□□□□ -0.27
CACNA1BQ00975 BX322562.1-201ENST00000617004 561 ntBASIC13.36□□□□□ -0.27
CACNA1BQ00975 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CACNA1BQ00975 AC097474.1-201ENST00000506481 1371 ntBASIC13.36□□□□□ -0.27
CACNA1BQ00975 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CACNA1BQ00975 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
CACNA1BQ00975 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CACNA1BQ00975 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CACNA1BQ00975 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CACNA1BQ00975 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CACNA1BQ00975 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.36□□□□□ -0.27
CACNA1BQ00975 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.36□□□□□ -0.27
CACNA1BQ00975 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC13.36□□□□□ -0.27
CACNA1BQ00975 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC13.36□□□□□ -0.27
CACNA1BQ00975 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC13.36□□□□□ -0.27
CACNA1BQ00975 AL137783.1-201ENST00000623494 1896 ntBASIC13.36□□□□□ -0.27
CACNA1BQ00975 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
CACNA1BQ00975 AC106886.4-201ENST00000623557 2502 ntBASIC13.36□□□□□ -0.27
CACNA1BQ00975 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC13.36□□□□□ -0.27
CACNA1BQ00975 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
CACNA1BQ00975 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
CACNA1BQ00975 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CACNA1BQ00975 AC007391.1-201ENST00000433893 504 ntTSL 2 BASIC13.36□□□□□ -0.27
CACNA1BQ00975 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC13.36□□□□□ -0.27
CACNA1BQ00975 MAP1LC3BP1-202ENST00000438342 516 ntTSL 3 BASIC13.36□□□□□ -0.27
CACNA1BQ00975 UGT1A12P-201ENST00000447084 853 ntBASIC13.36□□□□□ -0.27
CACNA1BQ00975 RN7SL767P-201ENST00000493013 295 ntBASIC13.36□□□□□ -0.27
CACNA1BQ00975 AC138781.1-201ENST00000501322 505 ntTSL 3 BASIC13.36□□□□□ -0.27
CACNA1BQ00975 MAFG-AS1-202ENST00000583492 969 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CACNA1BQ00975 AC092296.1-201ENST00000587018 566 ntTSL 4 BASIC13.36□□□□□ -0.27
CACNA1BQ00975 ZNF724-202ENST00000597037 780 ntTSL 2 BASIC13.36□□□□□ -0.27
CACNA1BQ00975 AC048382.6-201ENST00000621980 1223 ntBASIC13.36□□□□□ -0.27
CACNA1BQ00975 FKBP4P7-201ENST00000433874 1363 ntBASIC13.36□□□□□ -0.27
CACNA1BQ00975 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC13.36□□□□□ -0.27
CACNA1BQ00975 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CACNA1BQ00975 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC13.36□□□□□ -0.27
CACNA1BQ00975 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
CACNA1BQ00975 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CACNA1BQ00975 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
CACNA1BQ00975 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
CACNA1BQ00975 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
CACNA1BQ00975 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.36□□□□□ -0.27
CACNA1BQ00975 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CACNA1BQ00975 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
CACNA1BQ00975 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC13.36□□□□□ -0.27
CACNA1BQ00975 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CACNA1BQ00975 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC13.35□□□□□ -0.27
CACNA1BQ00975 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CACNA1BQ00975 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CACNA1BQ00975 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CACNA1BQ00975 AC139143.1-201ENST00000441772 1207 ntBASIC13.35□□□□□ -0.27
CACNA1BQ00975 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC13.35□□□□□ -0.27
CACNA1BQ00975 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
CACNA1BQ00975 RN7SL128P-201ENST00000467883 305 ntBASIC13.35□□□□□ -0.27
CACNA1BQ00975 ALG1L7P-201ENST00000502317 768 ntBASIC13.35□□□□□ -0.27
CACNA1BQ00975 ZNF268-208ENST00000539248 759 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CACNA1BQ00975 ZNF268-212ENST00000542711 861 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CACNA1BQ00975 AP003170.2-201ENST00000544730 786 ntBASIC13.35□□□□□ -0.27
CACNA1BQ00975 AC005736.3-201ENST00000571169 244 ntTSL 5 BASIC13.35□□□□□ -0.27
CACNA1BQ00975 CLDN6-203ENST00000572154 461 ntTSL 3 BASIC13.35□□□□□ -0.27
CACNA1BQ00975 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC13.35□□□□□ -0.27
CACNA1BQ00975 SIGLEC22P-201ENST00000599104 714 ntBASIC13.35□□□□□ -0.27
CACNA1BQ00975 DUX4L33-201ENST00000635217 958 ntBASIC13.35□□□□□ -0.27
CACNA1BQ00975 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
CACNA1BQ00975 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CACNA1BQ00975 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CACNA1BQ00975 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC13.35□□□□□ -0.27
CACNA1BQ00975 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CACNA1BQ00975 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.35□□□□□ -0.27
CACNA1BQ00975 LYRM4-205ENST00000464010 1401 ntTSL 3 BASIC13.35□□□□□ -0.27
CACNA1BQ00975 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
CACNA1BQ00975 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CACNA1BQ00975 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CACNA1BQ00975 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
CACNA1BQ00975 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CACNA1BQ00975 OSCP1-201ENST00000235532 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CACNA1BQ00975 OSCP1-203ENST00000356637 1463 ntTSL 5 BASIC13.35□□□□□ -0.27
CACNA1BQ00975 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CACNA1BQ00975 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CACNA1BQ00975 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
CACNA1BQ00975 SIRPB3P-201ENST00000340424 1216 ntBASIC13.35□□□□□ -0.27
CACNA1BQ00975 AP000354.1-201ENST00000396982 456 ntBASIC13.35□□□□□ -0.27
CACNA1BQ00975 MPV17-207ENST00000403262 665 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CACNA1BQ00975 AC000077.1-201ENST00000420012 953 ntBASIC13.35□□□□□ -0.27
CACNA1BQ00975 CCND3P1-201ENST00000438347 580 ntBASIC13.35□□□□□ -0.27
CACNA1BQ00975 OR4C14P-201ENST00000440929 923 ntBASIC13.35□□□□□ -0.27
CACNA1BQ00975 HINT1-205ENST00000508488 703 ntTSL 2 BASIC13.35□□□□□ -0.27
CACNA1BQ00975 MECP2-226ENST00000640414 897 ntTSL 5 BASIC13.35□□□□□ -0.27
CACNA1BQ00975 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CACNA1BQ00975 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CACNA1BQ00975 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms