Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDK3Q00526 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CDK3Q00526 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.36□□□□□ -0.11
CDK3Q00526 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CDK3Q00526 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC14.36□□□□□ -0.11
CDK3Q00526 MSRA-203ENST00000441698 788 ntTSL 2 BASIC14.36□□□□□ -0.11
CDK3Q00526 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC14.36□□□□□ -0.11
CDK3Q00526 AL133466.1-201ENST00000447582 150 ntBASIC14.36□□□□□ -0.11
CDK3Q00526 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CDK3Q00526 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC14.36□□□□□ -0.11
CDK3Q00526 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC14.36□□□□□ -0.11
CDK3Q00526 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC14.36□□□□□ -0.11
CDK3Q00526 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CDK3Q00526 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC14.36□□□□□ -0.11
CDK3Q00526 AC005586.2-201ENST00000563946 837 ntBASIC14.36□□□□□ -0.11
CDK3Q00526 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC14.36□□□□□ -0.11
CDK3Q00526 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC14.36□□□□□ -0.11
CDK3Q00526 MIR6074-201ENST00000612054 107 ntBASIC14.36□□□□□ -0.11
CDK3Q00526 PPA1-206ENST00000625364 644 ntTSL 5 BASIC14.36□□□□□ -0.11
CDK3Q00526 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC14.36□□□□□ -0.11
CDK3Q00526 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.36□□□□□ -0.11
CDK3Q00526 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CDK3Q00526 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.36□□□□□ -0.11
CDK3Q00526 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CDK3Q00526 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDK3Q00526 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
CDK3Q00526 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDK3Q00526 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.36□□□□□ -0.11
CDK3Q00526 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDK3Q00526 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDK3Q00526 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CDK3Q00526 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDK3Q00526 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.36□□□□□ -0.11
CDK3Q00526 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.36□□□□□ -0.11
CDK3Q00526 AL596257.1-201ENST00000641463 2694 ntBASIC14.36□□□□□ -0.11
CDK3Q00526 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDK3Q00526 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
CDK3Q00526 AL390755.1-201ENST00000623716 2027 ntBASIC14.36□□□□□ -0.11
CDK3Q00526 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDK3Q00526 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
CDK3Q00526 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CDK3Q00526 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.35□□□□□ -0.11
CDK3Q00526 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC14.35□□□□□ -0.11
CDK3Q00526 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDK3Q00526 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.35□□□□□ -0.11
CDK3Q00526 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
CDK3Q00526 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CDK3Q00526 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC14.35□□□□□ -0.11
CDK3Q00526 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDK3Q00526 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CDK3Q00526 AL161772.1-201ENST00000610494 4412 ntBASIC14.35□□□□□ -0.11
CDK3Q00526 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CDK3Q00526 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDK3Q00526 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC14.35□□□□□ -0.11
CDK3Q00526 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CDK3Q00526 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDK3Q00526 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14.35□□□□□ -0.11
CDK3Q00526 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.35□□□□□ -0.11
CDK3Q00526 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDK3Q00526 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDK3Q00526 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CDK3Q00526 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC14.35□□□□□ -0.11
CDK3Q00526 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC14.35□□□□□ -0.11
CDK3Q00526 AC239868.1-201ENST00000369385 493 ntBASIC14.35□□□□□ -0.11
CDK3Q00526 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDK3Q00526 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDK3Q00526 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC14.35□□□□□ -0.11
CDK3Q00526 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC14.35□□□□□ -0.11
CDK3Q00526 AC012618.1-201ENST00000461223 412 ntBASIC14.35□□□□□ -0.11
CDK3Q00526 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC14.35□□□□□ -0.11
CDK3Q00526 NUP210P1-202ENST00000504322 710 ntBASIC14.35□□□□□ -0.11
CDK3Q00526 AC245884.6-201ENST00000515672 1067 ntBASIC14.35□□□□□ -0.11
CDK3Q00526 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC14.35□□□□□ -0.11
CDK3Q00526 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CDK3Q00526 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC14.35□□□□□ -0.11
CDK3Q00526 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC14.35□□□□□ -0.11
CDK3Q00526 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC14.35□□□□□ -0.11
CDK3Q00526 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC14.35□□□□□ -0.11
CDK3Q00526 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC14.35□□□□□ -0.11
CDK3Q00526 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CDK3Q00526 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CDK3Q00526 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDK3Q00526 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDK3Q00526 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CDK3Q00526 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDK3Q00526 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDK3Q00526 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDK3Q00526 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC14.35□□□□□ -0.11
CDK3Q00526 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDK3Q00526 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.35□□□□□ -0.11
CDK3Q00526 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.35□□□□□ -0.11
CDK3Q00526 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CDK3Q00526 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.35□□□□□ -0.11
CDK3Q00526 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDK3Q00526 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDK3Q00526 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CDK3Q00526 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CDK3Q00526 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CDK3Q00526 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDK3Q00526 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 278 ms