Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
IRX4P78413 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
IRX4P78413 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
IRX4P78413 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
IRX4P78413 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
IRX4P78413 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
IRX4P78413 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
IRX4P78413 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
IRX4P78413 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
IRX4P78413 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15.39■□□□□ 0.05
IRX4P78413 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
IRX4P78413 AL662890.1-201ENST00000396818 632 ntBASIC15.39■□□□□ 0.05
IRX4P78413 MIR1202-201ENST00000408529 83 ntBASIC15.39■□□□□ 0.05
IRX4P78413 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC15.39■□□□□ 0.05
IRX4P78413 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
IRX4P78413 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC15.39■□□□□ 0.05
IRX4P78413 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.39■□□□□ 0.05
IRX4P78413 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
IRX4P78413 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC15.39■□□□□ 0.05
IRX4P78413 EIF4HP1-201ENST00000453115 687 ntBASIC15.39■□□□□ 0.05
IRX4P78413 BX284668.4-201ENST00000453917 508 ntBASIC15.39■□□□□ 0.05
IRX4P78413 RPSAP36-202ENST00000494591 1261 ntBASIC15.39■□□□□ 0.05
IRX4P78413 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
IRX4P78413 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15.39■□□□□ 0.05
IRX4P78413 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC15.39■□□□□ 0.05
IRX4P78413 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC15.39■□□□□ 0.05
IRX4P78413 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
IRX4P78413 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC15.39■□□□□ 0.05
IRX4P78413 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC15.39■□□□□ 0.05
IRX4P78413 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
IRX4P78413 AC132938.4-201ENST00000623835 848 ntBASIC15.39■□□□□ 0.05
IRX4P78413 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC15.39■□□□□ 0.05
IRX4P78413 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
IRX4P78413 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
IRX4P78413 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
IRX4P78413 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC15.39■□□□□ 0.05
IRX4P78413 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
IRX4P78413 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
IRX4P78413 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
IRX4P78413 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
IRX4P78413 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
IRX4P78413 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC15.39■□□□□ 0.05
IRX4P78413 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
IRX4P78413 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.39■□□□□ 0.05
IRX4P78413 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
IRX4P78413 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
IRX4P78413 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
IRX4P78413 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
IRX4P78413 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
IRX4P78413 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
IRX4P78413 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
IRX4P78413 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
IRX4P78413 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
IRX4P78413 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC15.38■□□□□ 0.05
IRX4P78413 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
IRX4P78413 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
IRX4P78413 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
IRX4P78413 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
IRX4P78413 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC15.38■□□□□ 0.05
IRX4P78413 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
IRX4P78413 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
IRX4P78413 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC15.38■□□□□ 0.05
IRX4P78413 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
IRX4P78413 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
IRX4P78413 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC15.38■□□□□ 0.05
IRX4P78413 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
IRX4P78413 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
IRX4P78413 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
IRX4P78413 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
IRX4P78413 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
IRX4P78413 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
IRX4P78413 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
IRX4P78413 GUK1-206ENST00000366723 845 ntTSL 5 BASIC15.38■□□□□ 0.05
IRX4P78413 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
IRX4P78413 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC15.38■□□□□ 0.05
IRX4P78413 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC15.38■□□□□ 0.05
IRX4P78413 MTX1P1-201ENST00000440904 838 ntBASIC15.38■□□□□ 0.05
IRX4P78413 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
IRX4P78413 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC15.38■□□□□ 0.05
IRX4P78413 KRT18P43-201ENST00000469825 1281 ntBASIC15.38■□□□□ 0.05
IRX4P78413 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
IRX4P78413 AC091804.1-201ENST00000486888 567 ntBASIC15.38■□□□□ 0.05
IRX4P78413 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
IRX4P78413 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC15.38■□□□□ 0.05
IRX4P78413 RERG-205ENST00000537647 935 ntTSL 2 BASIC15.38■□□□□ 0.05
IRX4P78413 AC105129.2-201ENST00000559536 390 ntBASIC15.38■□□□□ 0.05
IRX4P78413 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC15.38■□□□□ 0.05
IRX4P78413 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC15.38■□□□□ 0.05
IRX4P78413 AC107373.2-201ENST00000607735 490 ntBASIC15.38■□□□□ 0.05
IRX4P78413 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC15.38■□□□□ 0.05
IRX4P78413 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC15.38■□□□□ 0.05
IRX4P78413 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC15.38■□□□□ 0.05
IRX4P78413 MIR6727-201ENST00000620702 65 ntBASIC15.38■□□□□ 0.05
IRX4P78413 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
IRX4P78413 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
IRX4P78413 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
IRX4P78413 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
IRX4P78413 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
IRX4P78413 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
IRX4P78413 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms