Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VBP1P61758 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
VBP1P61758 AL121723.1-201ENST00000445194 1519 ntBASIC13.19□□□□□ -0.3
VBP1P61758 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VBP1P61758 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC13.19□□□□□ -0.3
VBP1P61758 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
VBP1P61758 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
VBP1P61758 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.19□□□□□ -0.3
VBP1P61758 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
VBP1P61758 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VBP1P61758 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VBP1P61758 F2-205ENST00000530231 1849 ntTSL 5 BASIC13.19□□□□□ -0.3
VBP1P61758 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VBP1P61758 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VBP1P61758 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
VBP1P61758 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
VBP1P61758 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC13.19□□□□□ -0.3
VBP1P61758 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
VBP1P61758 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
VBP1P61758 TFAMP1-201ENST00000412727 736 ntBASIC13.19□□□□□ -0.3
VBP1P61758 AF186996.4-201ENST00000467186 377 ntBASIC13.19□□□□□ -0.3
VBP1P61758 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC13.19□□□□□ -0.3
VBP1P61758 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC13.19□□□□□ -0.3
VBP1P61758 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC13.19□□□□□ -0.3
VBP1P61758 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC13.19□□□□□ -0.3
VBP1P61758 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC13.19□□□□□ -0.3
VBP1P61758 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
VBP1P61758 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC13.19□□□□□ -0.3
VBP1P61758 AC148477.8-201ENST00000624298 468 ntBASIC13.19□□□□□ -0.3
VBP1P61758 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VBP1P61758 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VBP1P61758 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VBP1P61758 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VBP1P61758 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VBP1P61758 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
VBP1P61758 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
VBP1P61758 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
VBP1P61758 AC022497.1-201ENST00000624916 3691 ntBASIC13.19□□□□□ -0.3
VBP1P61758 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VBP1P61758 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VBP1P61758 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
VBP1P61758 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VBP1P61758 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
VBP1P61758 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VBP1P61758 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
VBP1P61758 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC13.18□□□□□ -0.3
VBP1P61758 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
VBP1P61758 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
VBP1P61758 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VBP1P61758 AC024075.2-201ENST00000598112 1473 ntBASIC13.18□□□□□ -0.3
VBP1P61758 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
VBP1P61758 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
VBP1P61758 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
VBP1P61758 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC13.18□□□□□ -0.3
VBP1P61758 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VBP1P61758 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VBP1P61758 ANKRD20A1-201ENST00000562196 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VBP1P61758 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC13.18□□□□□ -0.3
VBP1P61758 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
VBP1P61758 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VBP1P61758 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
VBP1P61758 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VBP1P61758 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
VBP1P61758 RBM39-205ENST00000397370 612 ntTSL 2 BASIC13.18□□□□□ -0.3
VBP1P61758 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC13.18□□□□□ -0.3
VBP1P61758 KRT18P43-201ENST00000469825 1281 ntBASIC13.18□□□□□ -0.3
VBP1P61758 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC13.18□□□□□ -0.3
VBP1P61758 TOLLIP-AS1-201ENST00000530897 939 ntBASIC13.18□□□□□ -0.3
VBP1P61758 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC13.18□□□□□ -0.3
VBP1P61758 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC13.18□□□□□ -0.3
VBP1P61758 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC13.18□□□□□ -0.3
VBP1P61758 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
VBP1P61758 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC13.18□□□□□ -0.3
VBP1P61758 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC13.18□□□□□ -0.3
VBP1P61758 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
VBP1P61758 AL133387.2-201ENST00000422661 2222 ntTSL 2 BASIC13.18□□□□□ -0.3
VBP1P61758 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VBP1P61758 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC13.18□□□□□ -0.3
VBP1P61758 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
VBP1P61758 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC13.18□□□□□ -0.3
VBP1P61758 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
VBP1P61758 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
VBP1P61758 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VBP1P61758 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
VBP1P61758 AC022400.8-201ENST00000623453 3599 ntBASIC13.18□□□□□ -0.3
VBP1P61758 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
VBP1P61758 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VBP1P61758 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
VBP1P61758 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
VBP1P61758 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
VBP1P61758 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
VBP1P61758 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
VBP1P61758 TMOD1-201ENST00000259365 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VBP1P61758 DTX1-201ENST00000257600 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VBP1P61758 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VBP1P61758 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
VBP1P61758 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
VBP1P61758 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
VBP1P61758 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
VBP1P61758 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms