Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
CXCR4P61073 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CXCR4P61073 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CXCR4P61073 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
CXCR4P61073 AC015688.4-201ENST00000580780 1647 ntBASIC13.41□□□□□ -0.26
CXCR4P61073 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CXCR4P61073 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CXCR4P61073 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CXCR4P61073 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
CXCR4P61073 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC13.41□□□□□ -0.26
CXCR4P61073 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
CXCR4P61073 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CXCR4P61073 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CXCR4P61073 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
CXCR4P61073 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CXCR4P61073 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CXCR4P61073 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
CXCR4P61073 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CXCR4P61073 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC13.41□□□□□ -0.26
CXCR4P61073 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CXCR4P61073 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CXCR4P61073 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
CXCR4P61073 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
CXCR4P61073 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CXCR4P61073 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CXCR4P61073 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
CXCR4P61073 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CXCR4P61073 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CXCR4P61073 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.4□□□□□ -0.26
CXCR4P61073 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC13.4□□□□□ -0.26
CXCR4P61073 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CXCR4P61073 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CXCR4P61073 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
CXCR4P61073 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CXCR4P61073 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CXCR4P61073 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CXCR4P61073 AL023775.1-201ENST00000454907 1746 ntBASIC13.4□□□□□ -0.26
CXCR4P61073 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CXCR4P61073 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CXCR4P61073 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CXCR4P61073 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
CXCR4P61073 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CXCR4P61073 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CXCR4P61073 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CXCR4P61073 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
CXCR4P61073 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC13.4□□□□□ -0.26
CXCR4P61073 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CXCR4P61073 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
CXCR4P61073 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC13.4□□□□□ -0.26
CXCR4P61073 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
CXCR4P61073 WRB-204ENST00000398753 699 ntTSL 3 BASIC13.4□□□□□ -0.26
CXCR4P61073 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.4□□□□□ -0.26
CXCR4P61073 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
CXCR4P61073 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC13.4□□□□□ -0.26
CXCR4P61073 KLF2P3-201ENST00000451977 1087 ntBASIC13.4□□□□□ -0.26
CXCR4P61073 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC13.4□□□□□ -0.26
CXCR4P61073 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
CXCR4P61073 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
CXCR4P61073 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC13.4□□□□□ -0.26
CXCR4P61073 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
CXCR4P61073 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC13.4□□□□□ -0.26
CXCR4P61073 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC13.4□□□□□ -0.26
CXCR4P61073 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
CXCR4P61073 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC13.4□□□□□ -0.26
CXCR4P61073 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CXCR4P61073 MPI-209ENST00000564003 1195 ntTSL 2 BASIC13.4□□□□□ -0.26
CXCR4P61073 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC13.4□□□□□ -0.26
CXCR4P61073 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC13.4□□□□□ -0.26
CXCR4P61073 AL596442.2-201ENST00000610240 980 ntBASIC13.4□□□□□ -0.26
CXCR4P61073 TEX48-202ENST00000612244 662 ntTSL 3 BASIC13.4□□□□□ -0.26
CXCR4P61073 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.4□□□□□ -0.26
CXCR4P61073 AL158212.4-201ENST00000624062 1286 ntBASIC13.4□□□□□ -0.26
CXCR4P61073 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CXCR4P61073 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CXCR4P61073 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC13.4□□□□□ -0.26
CXCR4P61073 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC13.4□□□□□ -0.26
CXCR4P61073 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
CXCR4P61073 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CXCR4P61073 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CXCR4P61073 PCDHB18P-202ENST00000526308 3197 ntBASIC13.4□□□□□ -0.26
CXCR4P61073 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
CXCR4P61073 SALL4P5-201ENST00000419001 1760 ntBASIC13.4□□□□□ -0.26
CXCR4P61073 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CXCR4P61073 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
CXCR4P61073 AP000437.1-201ENST00000624057 2085 ntBASIC13.4□□□□□ -0.27
CXCR4P61073 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.27
CXCR4P61073 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC13.39□□□□□ -0.27
CXCR4P61073 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC13.39□□□□□ -0.27
CXCR4P61073 AL365181.3-201ENST00000605886 3222 ntBASIC13.39□□□□□ -0.27
CXCR4P61073 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC13.39□□□□□ -0.27
CXCR4P61073 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
CXCR4P61073 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC13.39□□□□□ -0.27
CXCR4P61073 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC13.39□□□□□ -0.27
CXCR4P61073 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC13.39□□□□□ -0.27
CXCR4P61073 MIR497HG-202ENST00000572453 3838 ntBASIC13.39□□□□□ -0.27
CXCR4P61073 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
CXCR4P61073 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CXCR4P61073 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CXCR4P61073 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CXCR4P61073 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms