Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC12.65□□□□□ -0.38
AP3S2P59780 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC12.65□□□□□ -0.38
AP3S2P59780 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC12.65□□□□□ -0.38
AP3S2P59780 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC12.65□□□□□ -0.38
AP3S2P59780 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC12.65□□□□□ -0.38
AP3S2P59780 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC12.65□□□□□ -0.38
AP3S2P59780 AC064836.3-201ENST00000607928 673 ntBASIC12.65□□□□□ -0.38
AP3S2P59780 AL773604.1-201ENST00000617417 272 ntBASIC12.65□□□□□ -0.38
AP3S2P59780 AC055717.3-201ENST00000622967 595 ntBASIC12.65□□□□□ -0.38
AP3S2P59780 AC148477.8-201ENST00000624298 468 ntBASIC12.65□□□□□ -0.38
AP3S2P59780 HFE2-206ENST00000634927 506 ntTSL 4 BASIC12.65□□□□□ -0.38
AP3S2P59780 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
AP3S2P59780 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC12.65□□□□□ -0.38
AP3S2P59780 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
AP3S2P59780 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
AP3S2P59780 AC011498.7-201ENST00000624986 2027 ntBASIC12.65□□□□□ -0.38
AP3S2P59780 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC12.65□□□□□ -0.38
AP3S2P59780 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
AP3S2P59780 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
AP3S2P59780 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC12.65□□□□□ -0.38
AP3S2P59780 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
AP3S2P59780 DYSF-206ENST00000409744 6564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
AP3S2P59780 DYSF-209ENST00000410041 6594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
AP3S2P59780 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
AP3S2P59780 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
AP3S2P59780 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
AP3S2P59780 KCNJ5-202ENST00000529694 5940 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
AP3S2P59780 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
AP3S2P59780 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
AP3S2P59780 MYT1-201ENST00000328439 5535 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
AP3S2P59780 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
AP3S2P59780 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.39
AP3S2P59780 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
AP3S2P59780 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
AP3S2P59780 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
AP3S2P59780 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC12.64□□□□□ -0.39
AP3S2P59780 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
AP3S2P59780 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
AP3S2P59780 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
AP3S2P59780 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
AP3S2P59780 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC12.64□□□□□ -0.39
AP3S2P59780 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
AP3S2P59780 KRT8P14-201ENST00000414254 1442 ntBASIC12.64□□□□□ -0.39
AP3S2P59780 TRPC6-201ENST00000344327 4612 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
AP3S2P59780 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
AP3S2P59780 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
AP3S2P59780 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
AP3S2P59780 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
AP3S2P59780 AL118506.1-201ENST00000601296 3082 ntBASIC12.64□□□□□ -0.39
AP3S2P59780 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
AP3S2P59780 GOLGA8IP-202ENST00000611635 2100 ntBASIC12.64□□□□□ -0.39
AP3S2P59780 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC12.64□□□□□ -0.39
AP3S2P59780 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
AP3S2P59780 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
AP3S2P59780 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
AP3S2P59780 UXT-AS1-201ENST00000590504 1525 ntBASIC12.64□□□□□ -0.39
AP3S2P59780 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
AP3S2P59780 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
AP3S2P59780 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
AP3S2P59780 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
AP3S2P59780 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
AP3S2P59780 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
AP3S2P59780 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
AP3S2P59780 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
AP3S2P59780 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
AP3S2P59780 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
AP3S2P59780 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC12.64□□□□□ -0.39
AP3S2P59780 TOMM22P5-201ENST00000416399 439 ntBASIC12.64□□□□□ -0.39
AP3S2P59780 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC12.64□□□□□ -0.39
AP3S2P59780 AC243562.1-201ENST00000560672 389 ntBASIC12.64□□□□□ -0.39
AP3S2P59780 LINC01225-203ENST00000563550 1244 ntBASIC12.64□□□□□ -0.39
AP3S2P59780 IGHV3OR16-6-201ENST00000568775 360 ntBASIC12.64□□□□□ -0.39
AP3S2P59780 PRR29-209ENST00000582540 967 ntTSL 2 BASIC12.64□□□□□ -0.39
AP3S2P59780 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
AP3S2P59780 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
AP3S2P59780 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
AP3S2P59780 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
AP3S2P59780 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
AP3S2P59780 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
AP3S2P59780 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
AP3S2P59780 RPS27L-201ENST00000330964 6434 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
AP3S2P59780 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
AP3S2P59780 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC12.64□□□□□ -0.39
AP3S2P59780 ACVR2A-201ENST00000241416 5728 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
AP3S2P59780 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
AP3S2P59780 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
AP3S2P59780 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
AP3S2P59780 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
AP3S2P59780 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC12.64□□□□□ -0.39
AP3S2P59780 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
AP3S2P59780 FBN1-201ENST00000316623 11756 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
AP3S2P59780 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC12.64□□□□□ -0.39
AP3S2P59780 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
AP3S2P59780 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
AP3S2P59780 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
AP3S2P59780 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
AP3S2P59780 INHBA-201ENST00000242208 6064 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
AP3S2P59780 DYSF-203ENST00000409366 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
AP3S2P59780 DYSF-205ENST00000409651 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
AP3S2P59780 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms