Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
CLDN12P56749 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CLDN12P56749 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CLDN12P56749 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CLDN12P56749 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
CLDN12P56749 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
CLDN12P56749 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CLDN12P56749 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CLDN12P56749 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CLDN12P56749 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CLDN12P56749 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
CLDN12P56749 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
CLDN12P56749 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CLDN12P56749 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CLDN12P56749 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CLDN12P56749 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CLDN12P56749 PCDHA5-203ENST00000614258 4248 ntBASIC12.82□□□□□ -0.36
CLDN12P56749 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC12.82□□□□□ -0.36
CLDN12P56749 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC12.82□□□□□ -0.36
CLDN12P56749 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC12.82□□□□□ -0.36
CLDN12P56749 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
CLDN12P56749 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLDN12P56749 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLDN12P56749 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLDN12P56749 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
CLDN12P56749 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CLDN12P56749 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC12.81□□□□□ -0.36
CLDN12P56749 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
CLDN12P56749 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLDN12P56749 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CLDN12P56749 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLDN12P56749 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLDN12P56749 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC12.81□□□□□ -0.36
CLDN12P56749 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLDN12P56749 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
CLDN12P56749 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
CLDN12P56749 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
CLDN12P56749 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC12.81□□□□□ -0.36
CLDN12P56749 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLDN12P56749 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC12.81□□□□□ -0.36
CLDN12P56749 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC12.81□□□□□ -0.36
CLDN12P56749 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CLDN12P56749 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CLDN12P56749 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLDN12P56749 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLDN12P56749 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLDN12P56749 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLDN12P56749 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CLDN12P56749 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
CLDN12P56749 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CLDN12P56749 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC12.81□□□□□ -0.36
CLDN12P56749 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
CLDN12P56749 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC12.81□□□□□ -0.36
CLDN12P56749 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC12.81□□□□□ -0.36
CLDN12P56749 AC027369.6-201ENST00000525520 931 ntBASIC12.81□□□□□ -0.36
CLDN12P56749 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC12.81□□□□□ -0.36
CLDN12P56749 AC092337.1-201ENST00000568699 1129 ntBASIC12.81□□□□□ -0.36
CLDN12P56749 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC12.81□□□□□ -0.36
CLDN12P56749 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC12.81□□□□□ -0.36
CLDN12P56749 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC12.81□□□□□ -0.36
CLDN12P56749 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLDN12P56749 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLDN12P56749 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLDN12P56749 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CLDN12P56749 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLDN12P56749 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC12.81□□□□□ -0.36
CLDN12P56749 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
CLDN12P56749 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC12.81□□□□□ -0.36
CLDN12P56749 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC12.81□□□□□ -0.36
CLDN12P56749 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CLDN12P56749 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLDN12P56749 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC12.81□□□□□ -0.36
CLDN12P56749 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
CLDN12P56749 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLDN12P56749 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
CLDN12P56749 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC12.81□□□□□ -0.36
CLDN12P56749 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLDN12P56749 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLDN12P56749 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC12.81□□□□□ -0.36
CLDN12P56749 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC12.81□□□□□ -0.36
CLDN12P56749 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLDN12P56749 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
CLDN12P56749 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
CLDN12P56749 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLDN12P56749 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CLDN12P56749 AL591122.2-201ENST00000624125 1853 ntBASIC12.8□□□□□ -0.36
CLDN12P56749 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLDN12P56749 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLDN12P56749 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLDN12P56749 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLDN12P56749 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLDN12P56749 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC12.8□□□□□ -0.36
CLDN12P56749 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
CLDN12P56749 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CLDN12P56749 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
CLDN12P56749 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC12.8□□□□□ -0.36
CLDN12P56749 HPD-204ENST00000543163 1709 ntTSL 5 BASIC12.8□□□□□ -0.36
CLDN12P56749 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
CLDN12P56749 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CLDN12P56749 STK3-218ENST00000617590 2485 ntTSL 5 BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms