Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
NR1H2P55055 AL596325.1-201ENST00000563991 1082 ntBASIC14.02□□□□□ -0.17
NR1H2P55055 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.02□□□□□ -0.17
NR1H2P55055 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.02□□□□□ -0.17
NR1H2P55055 AC140912.1-201ENST00000577171 1054 ntBASIC14.02□□□□□ -0.17
NR1H2P55055 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.02□□□□□ -0.17
NR1H2P55055 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.02□□□□□ -0.17
NR1H2P55055 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.02□□□□□ -0.17
NR1H2P55055 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.02□□□□□ -0.17
NR1H2P55055 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.02□□□□□ -0.17
NR1H2P55055 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.02□□□□□ -0.17
NR1H2P55055 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.02□□□□□ -0.17
NR1H2P55055 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NR1H2P55055 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
NR1H2P55055 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC14.02□□□□□ -0.17
NR1H2P55055 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
NR1H2P55055 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
NR1H2P55055 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC14.02□□□□□ -0.17
NR1H2P55055 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NR1H2P55055 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NR1H2P55055 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NR1H2P55055 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
NR1H2P55055 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NR1H2P55055 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC14.02□□□□□ -0.17
NR1H2P55055 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NR1H2P55055 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
NR1H2P55055 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC14.02□□□□□ -0.17
NR1H2P55055 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
NR1H2P55055 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
NR1H2P55055 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.01□□□□□ -0.17
NR1H2P55055 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.01□□□□□ -0.17
NR1H2P55055 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC14.01□□□□□ -0.17
NR1H2P55055 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC14.01□□□□□ -0.17
NR1H2P55055 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
NR1H2P55055 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
NR1H2P55055 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NR1H2P55055 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NR1H2P55055 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
NR1H2P55055 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NR1H2P55055 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NR1H2P55055 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NR1H2P55055 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NR1H2P55055 CU639417.3-201ENST00000624240 1404 ntBASIC14.01□□□□□ -0.17
NR1H2P55055 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
NR1H2P55055 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC14.01□□□□□ -0.17
NR1H2P55055 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC14.01□□□□□ -0.17
NR1H2P55055 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NR1H2P55055 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NR1H2P55055 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
NR1H2P55055 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NR1H2P55055 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NR1H2P55055 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
NR1H2P55055 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC14.01□□□□□ -0.17
NR1H2P55055 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.01□□□□□ -0.17
NR1H2P55055 AC098614.1-201ENST00000368528 745 ntBASIC14.01□□□□□ -0.17
NR1H2P55055 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
NR1H2P55055 MEP1AP4-201ENST00000423244 1087 ntBASIC14.01□□□□□ -0.17
NR1H2P55055 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC14.01□□□□□ -0.17
NR1H2P55055 PHKG1P2-201ENST00000457537 863 ntBASIC14.01□□□□□ -0.17
NR1H2P55055 SDHAP3-202ENST00000515467 728 ntBASIC14.01□□□□□ -0.17
NR1H2P55055 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.01□□□□□ -0.17
NR1H2P55055 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.01□□□□□ -0.17
NR1H2P55055 TP53TG3HP-202ENST00000569755 579 ntBASIC14.01□□□□□ -0.17
NR1H2P55055 MIR497HG-202ENST00000572453 3838 ntBASIC14.01□□□□□ -0.17
NR1H2P55055 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
NR1H2P55055 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC14.01□□□□□ -0.17
NR1H2P55055 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
NR1H2P55055 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
NR1H2P55055 AL033527.5-202ENST00000641632 1098 ntBASIC14.01□□□□□ -0.17
NR1H2P55055 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
NR1H2P55055 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NR1H2P55055 AL354702.1-201ENST00000442006 1960 ntBASIC14.01□□□□□ -0.17
NR1H2P55055 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
NR1H2P55055 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC14.01□□□□□ -0.17
NR1H2P55055 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
NR1H2P55055 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
NR1H2P55055 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC14.01□□□□□ -0.17
NR1H2P55055 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NR1H2P55055 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NR1H2P55055 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
NR1H2P55055 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NR1H2P55055 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
NR1H2P55055 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
NR1H2P55055 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
NR1H2P55055 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NR1H2P55055 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NR1H2P55055 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14□□□□□ -0.17
NR1H2P55055 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14□□□□□ -0.17
NR1H2P55055 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NR1H2P55055 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
NR1H2P55055 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NR1H2P55055 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NR1H2P55055 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
NR1H2P55055 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
NR1H2P55055 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NR1H2P55055 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
NR1H2P55055 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NR1H2P55055 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
NR1H2P55055 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14□□□□□ -0.17
NR1H2P55055 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms