Protein–RNA interactions for Protein: P42695

NCAPD3, Condensin-2 complex subunit D3, humanhuman

Predictions only

Length 1,498 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3P42695 SNX20-205ENST00000610485 557 ntTSL 5 BASIC24.82■■□□□ 1.56
NCAPD3P42695 MRPS31P4-202ENST00000613769 583 ntTSL 4 BASIC24.82■■□□□ 1.56
NCAPD3P42695 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
NCAPD3P42695 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC24.81■■□□□ 1.56
NCAPD3P42695 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC24.81■■□□□ 1.56
NCAPD3P42695 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC24.81■■□□□ 1.56
NCAPD3P42695 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC24.81■■□□□ 1.56
NCAPD3P42695 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC24.81■■□□□ 1.56
NCAPD3P42695 NR1I3-201ENST00000367979 1074 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
NCAPD3P42695 NR1I3-207ENST00000367985 1074 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
NCAPD3P42695 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC24.81■■□□□ 1.56
NCAPD3P42695 AL021391.1-201ENST00000454439 545 ntTSL 4 BASIC24.81■■□□□ 1.56
NCAPD3P42695 NR1I3-225ENST00000508387 634 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
NCAPD3P42695 RNA5SP288-201ENST00000516075 93 ntBASIC24.81■■□□□ 1.56
NCAPD3P42695 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC24.81■■□□□ 1.56
NCAPD3P42695 BPIFB6-201ENST00000349552 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
NCAPD3P42695 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
NCAPD3P42695 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
NCAPD3P42695 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC24.81■■□□□ 1.56
NCAPD3P42695 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
NCAPD3P42695 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
NCAPD3P42695 GPI-205ENST00000586425 1799 ntTSL 5 BASIC24.81■■□□□ 1.56
NCAPD3P42695 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
NCAPD3P42695 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
NCAPD3P42695 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
NCAPD3P42695 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
NCAPD3P42695 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
NCAPD3P42695 RPL4P6-201ENST00000438116 1304 ntBASIC24.8■■□□□ 1.56
NCAPD3P42695 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC24.8■■□□□ 1.56
NCAPD3P42695 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC24.8■■□□□ 1.56
NCAPD3P42695 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC24.8■■□□□ 1.56
NCAPD3P42695 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
NCAPD3P42695 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC24.8■■□□□ 1.56
NCAPD3P42695 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
NCAPD3P42695 AC093495.1-201ENST00000420253 1067 ntTSL 4 BASIC24.8■■□□□ 1.56
NCAPD3P42695 CD37-203ENST00000426897 1204 ntTSL 2 BASIC24.8■■□□□ 1.56
NCAPD3P42695 AC023051.2-201ENST00000541141 460 ntBASIC24.8■■□□□ 1.56
NCAPD3P42695 PHBP18-201ENST00000546648 813 ntBASIC24.8■■□□□ 1.56
NCAPD3P42695 AC090282.1-201ENST00000572821 534 ntTSL 3 BASIC24.8■■□□□ 1.56
NCAPD3P42695 MIR5091-201ENST00000578707 93 ntBASIC24.8■■□□□ 1.56
NCAPD3P42695 ZNF850-201ENST00000589390 523 ntTSL 3 BASIC24.8■■□□□ 1.56
NCAPD3P42695 AC083798.2-202ENST00000609469 553 ntTSL 4 BASIC24.8■■□□□ 1.56
NCAPD3P42695 AL590556.2-202ENST00000636906 844 ntBASIC24.8■■□□□ 1.56
NCAPD3P42695 NR1I2-206ENST00000638727 1194 ntAPPRIS ALT2 TSL 5 BASIC24.8■■□□□ 1.56
NCAPD3P42695 AL354702.1-201ENST00000442006 1960 ntBASIC24.8■■□□□ 1.56
NCAPD3P42695 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
NCAPD3P42695 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
NCAPD3P42695 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC24.8■■□□□ 1.56
NCAPD3P42695 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
NCAPD3P42695 MAGEC3-205ENST00000544766 1707 ntAPPRIS ALT2 TSL 5 BASIC24.8■■□□□ 1.56
NCAPD3P42695 SULT1A2-202ENST00000395630 1322 ntAPPRIS P1 TSL 5 BASIC24.8■■□□□ 1.56
NCAPD3P42695 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC24.79■■□□□ 1.56
NCAPD3P42695 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC24.79■■□□□ 1.56
NCAPD3P42695 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
NCAPD3P42695 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
NCAPD3P42695 CORO1C-203ENST00000421578 1296 ntTSL 2 BASIC24.79■■□□□ 1.56
NCAPD3P42695 HNRNPC-221ENST00000555883 1182 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
NCAPD3P42695 SULT1A3-206ENST00000563322 906 ntAPPRIS ALT1 TSL 1 (best) BASIC24.79■■□□□ 1.56
NCAPD3P42695 TPST2P1-201ENST00000564073 1102 ntBASIC24.79■■□□□ 1.56
NCAPD3P42695 SULT1A4-204ENST00000565290 906 ntAPPRIS ALT1 TSL 1 (best) BASIC24.79■■□□□ 1.56
NCAPD3P42695 AC007610.1-201ENST00000568130 498 ntTSL 3 BASIC24.79■■□□□ 1.56
NCAPD3P42695 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC24.79■■□□□ 1.56
NCAPD3P42695 EMP3-204ENST00000596315 761 ntTSL 2 BASIC24.79■■□□□ 1.56
NCAPD3P42695 Z82244.2-201ENST00000632196 448 ntBASIC24.79■■□□□ 1.56
NCAPD3P42695 LINC02498-201ENST00000635390 1065 ntTSL 5 BASIC24.79■■□□□ 1.56
NCAPD3P42695 AC138627.1-201ENST00000641127 1257 ntBASIC24.79■■□□□ 1.56
NCAPD3P42695 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC24.79■■□□□ 1.56
NCAPD3P42695 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
NCAPD3P42695 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
NCAPD3P42695 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC24.79■■□□□ 1.56
NCAPD3P42695 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC24.79■■□□□ 1.56
NCAPD3P42695 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
NCAPD3P42695 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC24.79■■□□□ 1.56
NCAPD3P42695 OSCP1-201ENST00000235532 1455 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
NCAPD3P42695 OSCP1-203ENST00000356637 1463 ntTSL 5 BASIC24.78■■□□□ 1.56
NCAPD3P42695 CCL17-201ENST00000219244 615 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
NCAPD3P42695 EXOSC7-201ENST00000265564 1055 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
NCAPD3P42695 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC24.78■■□□□ 1.56
NCAPD3P42695 CD44-224ENST00000526669 870 ntTSL 5 BASIC24.78■■□□□ 1.56
NCAPD3P42695 AL513165.2-203ENST00000537239 717 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
NCAPD3P42695 SLC25A3-206ENST00000547534 556 ntTSL 2 BASIC24.78■■□□□ 1.56
NCAPD3P42695 GLT8D2-204ENST00000547583 862 ntTSL 5 BASIC24.78■■□□□ 1.56
NCAPD3P42695 IDH3A-213ENST00000559205 566 ntTSL 4 BASIC24.78■■□□□ 1.56
NCAPD3P42695 AC004584.1-201ENST00000572187 549 ntTSL 3 BASIC24.78■■□□□ 1.56
NCAPD3P42695 ECSIT-211ENST00000592312 1286 ntTSL 5 BASIC24.78■■□□□ 1.56
NCAPD3P42695 AC079779.4-201ENST00000619113 548 ntTSL 5 BASIC24.78■■□□□ 1.56
NCAPD3P42695 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC24.78■■□□□ 1.56
NCAPD3P42695 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
NCAPD3P42695 AC026691.1-201ENST00000602502 2017 ntBASIC24.78■■□□□ 1.56
NCAPD3P42695 ECI2-201ENST00000361538 1380 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
NCAPD3P42695 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
NCAPD3P42695 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
NCAPD3P42695 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC24.77■■□□□ 1.56
NCAPD3P42695 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
NCAPD3P42695 FAM9C-202ENST00000380625 1122 ntAPPRIS P2 TSL 1 (best) BASIC24.77■■□□□ 1.56
NCAPD3P42695 ACOT6-201ENST00000381139 1004 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
NCAPD3P42695 CFL1P6-201ENST00000400899 494 ntBASIC24.77■■□□□ 1.56
NCAPD3P42695 AL513165.1-201ENST00000413915 289 ntTSL 3 BASIC24.77■■□□□ 1.56
NCAPD3P42695 GHRL-206ENST00000430179 856 ntAPPRIS ALT1 TSL 1 (best) BASIC24.77■■□□□ 1.56
NCAPD3P42695 RNASEH2CP1-201ENST00000454281 502 ntBASIC24.77■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms