Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RFC3P40938 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.5□□□□□ -0.25
RFC3P40938 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.5□□□□□ -0.25
RFC3P40938 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RFC3P40938 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
RFC3P40938 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RFC3P40938 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
RFC3P40938 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
RFC3P40938 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RFC3P40938 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
RFC3P40938 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RFC3P40938 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.49□□□□□ -0.25
RFC3P40938 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.49□□□□□ -0.25
RFC3P40938 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
RFC3P40938 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RFC3P40938 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RFC3P40938 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RFC3P40938 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC13.49□□□□□ -0.25
RFC3P40938 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RFC3P40938 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.49□□□□□ -0.25
RFC3P40938 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RFC3P40938 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RFC3P40938 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC13.49□□□□□ -0.25
RFC3P40938 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
RFC3P40938 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RFC3P40938 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RFC3P40938 DPM3-202ENST00000368399 517 ntBASIC13.49□□□□□ -0.25
RFC3P40938 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC13.49□□□□□ -0.25
RFC3P40938 KRTAP19-9P-201ENST00000421795 191 ntBASIC13.49□□□□□ -0.25
RFC3P40938 RPL18P13-201ENST00000478088 569 ntBASIC13.49□□□□□ -0.25
RFC3P40938 TSACC-208ENST00000481479 741 ntTSL 2 BASIC13.49□□□□□ -0.25
RFC3P40938 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC13.49□□□□□ -0.25
RFC3P40938 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC13.49□□□□□ -0.25
RFC3P40938 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC13.49□□□□□ -0.25
RFC3P40938 AC013355.1-201ENST00000562625 723 ntBASIC13.49□□□□□ -0.25
RFC3P40938 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RFC3P40938 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RFC3P40938 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RFC3P40938 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC13.49□□□□□ -0.25
RFC3P40938 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC13.49□□□□□ -0.25
RFC3P40938 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
RFC3P40938 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
RFC3P40938 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
RFC3P40938 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RFC3P40938 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC13.49□□□□□ -0.25
RFC3P40938 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
RFC3P40938 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RFC3P40938 AC244394.1-201ENST00000435000 1665 ntBASIC13.49□□□□□ -0.25
RFC3P40938 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
RFC3P40938 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RFC3P40938 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RFC3P40938 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
RFC3P40938 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RFC3P40938 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC13.49□□□□□ -0.25
RFC3P40938 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RFC3P40938 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RFC3P40938 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC13.48□□□□□ -0.25
RFC3P40938 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.48□□□□□ -0.25
RFC3P40938 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
RFC3P40938 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.48□□□□□ -0.25
RFC3P40938 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC13.48□□□□□ -0.25
RFC3P40938 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RFC3P40938 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
RFC3P40938 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RFC3P40938 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RFC3P40938 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
RFC3P40938 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
RFC3P40938 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RFC3P40938 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
RFC3P40938 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RFC3P40938 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.48□□□□□ -0.25
RFC3P40938 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
RFC3P40938 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RFC3P40938 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
RFC3P40938 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC13.48□□□□□ -0.25
RFC3P40938 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RFC3P40938 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RFC3P40938 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
RFC3P40938 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC13.48□□□□□ -0.25
RFC3P40938 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RFC3P40938 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RFC3P40938 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC13.48□□□□□ -0.25
RFC3P40938 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC13.48□□□□□ -0.25
RFC3P40938 AC010141.1-201ENST00000411585 623 ntBASIC13.48□□□□□ -0.25
RFC3P40938 ACTG1P2-201ENST00000415776 1125 ntBASIC13.48□□□□□ -0.25
RFC3P40938 ACTG1P11-201ENST00000425411 1125 ntBASIC13.48□□□□□ -0.25
RFC3P40938 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RFC3P40938 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC13.48□□□□□ -0.25
RFC3P40938 AC022217.1-201ENST00000521069 738 ntBASIC13.48□□□□□ -0.25
RFC3P40938 HNRNPA1P36-201ENST00000521313 955 ntBASIC13.48□□□□□ -0.25
RFC3P40938 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC13.48□□□□□ -0.25
RFC3P40938 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC13.48□□□□□ -0.25
RFC3P40938 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC13.48□□□□□ -0.25
RFC3P40938 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RFC3P40938 AC008805.1-201ENST00000590892 364 ntBASIC13.48□□□□□ -0.25
RFC3P40938 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC13.48□□□□□ -0.25
RFC3P40938 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC13.48□□□□□ -0.25
RFC3P40938 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.48□□□□□ -0.25
RFC3P40938 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.48□□□□□ -0.25
RFC3P40938 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms