Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC14.56□□□□□ -0.08
HMGCLP35914 AC022748.3-201ENST00000621828 275 ntBASIC14.56□□□□□ -0.08
HMGCLP35914 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HMGCLP35914 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HMGCLP35914 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
HMGCLP35914 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HMGCLP35914 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HMGCLP35914 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HMGCLP35914 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
HMGCLP35914 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.56□□□□□ -0.08
HMGCLP35914 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HMGCLP35914 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
HMGCLP35914 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC14.56□□□□□ -0.08
HMGCLP35914 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
HMGCLP35914 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HMGCLP35914 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
HMGCLP35914 AC020910.6-201ENST00000623084 1459 ntBASIC14.56□□□□□ -0.08
HMGCLP35914 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
HMGCLP35914 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HMGCLP35914 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC14.56□□□□□ -0.08
HMGCLP35914 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HMGCLP35914 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC14.56□□□□□ -0.08
HMGCLP35914 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HMGCLP35914 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC14.56□□□□□ -0.08
HMGCLP35914 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
HMGCLP35914 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.55□□□□□ -0.08
HMGCLP35914 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
HMGCLP35914 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.55□□□□□ -0.08
HMGCLP35914 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HMGCLP35914 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.55□□□□□ -0.08
HMGCLP35914 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
HMGCLP35914 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HMGCLP35914 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
HMGCLP35914 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.55□□□□□ -0.08
HMGCLP35914 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.55□□□□□ -0.08
HMGCLP35914 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC14.55□□□□□ -0.08
HMGCLP35914 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HMGCLP35914 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC14.55□□□□□ -0.08
HMGCLP35914 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HMGCLP35914 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
HMGCLP35914 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
HMGCLP35914 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
HMGCLP35914 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HMGCLP35914 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HMGCLP35914 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HMGCLP35914 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC14.55□□□□□ -0.08
HMGCLP35914 KRTAP10-13P-201ENST00000412914 571 ntBASIC14.55□□□□□ -0.08
HMGCLP35914 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HMGCLP35914 RNMTL1P1-201ENST00000454103 560 ntBASIC14.55□□□□□ -0.08
HMGCLP35914 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC14.55□□□□□ -0.08
HMGCLP35914 AC006122.1-201ENST00000493323 440 ntBASIC14.55□□□□□ -0.08
HMGCLP35914 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
HMGCLP35914 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC14.55□□□□□ -0.08
HMGCLP35914 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC14.55□□□□□ -0.08
HMGCLP35914 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HMGCLP35914 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
HMGCLP35914 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
HMGCLP35914 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HMGCLP35914 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
HMGCLP35914 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HMGCLP35914 AC004899.1-201ENST00000424687 1714 ntBASIC14.55□□□□□ -0.08
HMGCLP35914 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HMGCLP35914 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
HMGCLP35914 MBLAC2-202ENST00000514906 1936 ntBASIC14.54□□□□□ -0.08
HMGCLP35914 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
HMGCLP35914 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HMGCLP35914 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.54□□□□□ -0.08
HMGCLP35914 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC14.54□□□□□ -0.08
HMGCLP35914 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HMGCLP35914 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HMGCLP35914 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.54□□□□□ -0.08
HMGCLP35914 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HMGCLP35914 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HMGCLP35914 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
HMGCLP35914 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
HMGCLP35914 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
HMGCLP35914 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HMGCLP35914 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC14.54□□□□□ -0.08
HMGCLP35914 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HMGCLP35914 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HMGCLP35914 VDAC1P1-201ENST00000439229 848 ntBASIC14.54□□□□□ -0.08
HMGCLP35914 AC244107.1-201ENST00000442033 332 ntBASIC14.54□□□□□ -0.08
HMGCLP35914 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC14.54□□□□□ -0.08
HMGCLP35914 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC14.54□□□□□ -0.08
HMGCLP35914 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HMGCLP35914 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC14.54□□□□□ -0.08
HMGCLP35914 AC133540.1-201ENST00000620845 1019 ntBASIC14.54□□□□□ -0.08
HMGCLP35914 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
HMGCLP35914 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC14.54□□□□□ -0.08
HMGCLP35914 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
HMGCLP35914 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HMGCLP35914 AC018735.1-201ENST00000437208 1502 ntBASIC14.54□□□□□ -0.08
HMGCLP35914 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HMGCLP35914 CYP4F23P-201ENST00000593402 1579 ntBASIC14.54□□□□□ -0.08
HMGCLP35914 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HMGCLP35914 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HMGCLP35914 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.54□□□□□ -0.08
HMGCLP35914 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HMGCLP35914 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HMGCLP35914 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms