Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PDE6BP35913 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
PDE6BP35913 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PDE6BP35913 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
PDE6BP35913 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.83■□□□□ 0.45
PDE6BP35913 AC068587.6-202ENST00000641839 5619 ntBASIC17.83■□□□□ 0.45
PDE6BP35913 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC17.83■□□□□ 0.45
PDE6BP35913 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PDE6BP35913 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
PDE6BP35913 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PDE6BP35913 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PDE6BP35913 RNVU1-8-201ENST00000364272 125 ntBASIC17.83■□□□□ 0.44
PDE6BP35913 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PDE6BP35913 NME4-203ENST00000397722 1232 ntTSL 2 BASIC17.83■□□□□ 0.44
PDE6BP35913 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
PDE6BP35913 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PDE6BP35913 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC17.83■□□□□ 0.44
PDE6BP35913 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC17.83■□□□□ 0.44
PDE6BP35913 OR51A9P-201ENST00000422578 911 ntBASIC17.83■□□□□ 0.44
PDE6BP35913 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC17.83■□□□□ 0.44
PDE6BP35913 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PDE6BP35913 RN7SL564P-201ENST00000496309 250 ntBASIC17.83■□□□□ 0.44
PDE6BP35913 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC17.83■□□□□ 0.44
PDE6BP35913 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC17.83■□□□□ 0.44
PDE6BP35913 AC006483.2-201ENST00000609813 515 ntBASIC17.83■□□□□ 0.44
PDE6BP35913 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC17.83■□□□□ 0.44
PDE6BP35913 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
PDE6BP35913 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PDE6BP35913 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PDE6BP35913 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PDE6BP35913 PCDHA1-201ENST00000378133 2726 ntBASIC17.83■□□□□ 0.44
PDE6BP35913 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC17.83■□□□□ 0.44
PDE6BP35913 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PDE6BP35913 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.44
PDE6BP35913 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PDE6BP35913 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC17.82■□□□□ 0.44
PDE6BP35913 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC17.82■□□□□ 0.44
PDE6BP35913 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDE6BP35913 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDE6BP35913 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PDE6BP35913 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDE6BP35913 AC136621.1-201ENST00000624017 2304 ntBASIC17.82■□□□□ 0.44
PDE6BP35913 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC17.82■□□□□ 0.44
PDE6BP35913 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
PDE6BP35913 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
PDE6BP35913 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PDE6BP35913 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDE6BP35913 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC17.82■□□□□ 0.44
PDE6BP35913 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDE6BP35913 SURF4-203ENST00000371991 715 ntTSL 3 BASIC17.82■□□□□ 0.44
PDE6BP35913 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC17.82■□□□□ 0.44
PDE6BP35913 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
PDE6BP35913 AC006987.1-201ENST00000413610 527 ntBASIC17.82■□□□□ 0.44
PDE6BP35913 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDE6BP35913 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC17.82■□□□□ 0.44
PDE6BP35913 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC17.82■□□□□ 0.44
PDE6BP35913 AC108734.2-201ENST00000420887 1069 ntBASIC17.82■□□□□ 0.44
PDE6BP35913 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
PDE6BP35913 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
PDE6BP35913 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC17.82■□□□□ 0.44
PDE6BP35913 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC17.82■□□□□ 0.44
PDE6BP35913 RN7SL582P-201ENST00000491078 279 ntBASIC17.82■□□□□ 0.44
PDE6BP35913 GAS7-216ENST00000583882 553 ntTSL 5 BASIC17.82■□□□□ 0.44
PDE6BP35913 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC17.82■□□□□ 0.44
PDE6BP35913 EIF5AP2-201ENST00000585668 1047 ntBASIC17.82■□□□□ 0.44
PDE6BP35913 AC010632.2-201ENST00000588369 1224 ntBASIC17.82■□□□□ 0.44
PDE6BP35913 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC17.82■□□□□ 0.44
PDE6BP35913 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PDE6BP35913 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDE6BP35913 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PDE6BP35913 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDE6BP35913 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDE6BP35913 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDE6BP35913 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PDE6BP35913 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDE6BP35913 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDE6BP35913 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PDE6BP35913 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDE6BP35913 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC17.82■□□□□ 0.44
PDE6BP35913 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PDE6BP35913 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDE6BP35913 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PDE6BP35913 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
PDE6BP35913 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDE6BP35913 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
PDE6BP35913 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDE6BP35913 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDE6BP35913 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDE6BP35913 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDE6BP35913 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PDE6BP35913 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.81■□□□□ 0.44
PDE6BP35913 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDE6BP35913 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC17.81■□□□□ 0.44
PDE6BP35913 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC17.81■□□□□ 0.44
PDE6BP35913 GSN-206ENST00000394353 2311 ntTSL 2 BASIC17.81■□□□□ 0.44
PDE6BP35913 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDE6BP35913 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PDE6BP35913 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
PDE6BP35913 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC17.81■□□□□ 0.44
PDE6BP35913 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms