Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
KRT20P35900 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
KRT20P35900 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
KRT20P35900 CICP20-201ENST00000443330 2801 ntBASIC14.06□□□□□ -0.16
KRT20P35900 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
KRT20P35900 AC134312.5-201ENST00000568031 1313 ntBASIC14.06□□□□□ -0.16
KRT20P35900 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.06□□□□□ -0.16
KRT20P35900 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
KRT20P35900 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
KRT20P35900 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
KRT20P35900 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
KRT20P35900 KRT8P14-201ENST00000414254 1442 ntBASIC14.06□□□□□ -0.16
KRT20P35900 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC14.06□□□□□ -0.16
KRT20P35900 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
KRT20P35900 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
KRT20P35900 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.05□□□□□ -0.16
KRT20P35900 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
KRT20P35900 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
KRT20P35900 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC14.05□□□□□ -0.16
KRT20P35900 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC14.05□□□□□ -0.16
KRT20P35900 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
KRT20P35900 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
KRT20P35900 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC14.05□□□□□ -0.16
KRT20P35900 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
KRT20P35900 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
KRT20P35900 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC14.05□□□□□ -0.16
KRT20P35900 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
KRT20P35900 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
KRT20P35900 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
KRT20P35900 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
KRT20P35900 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
KRT20P35900 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
KRT20P35900 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
KRT20P35900 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
KRT20P35900 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
KRT20P35900 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.05□□□□□ -0.16
KRT20P35900 USE1-206ENST00000595101 1776 ntTSL 2 BASIC14.05□□□□□ -0.16
KRT20P35900 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
KRT20P35900 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC14.05□□□□□ -0.16
KRT20P35900 BAATP1-201ENST00000412284 1225 ntBASIC14.05□□□□□ -0.16
KRT20P35900 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC14.05□□□□□ -0.16
KRT20P35900 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC14.05□□□□□ -0.16
KRT20P35900 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
KRT20P35900 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC14.05□□□□□ -0.16
KRT20P35900 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
KRT20P35900 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC14.05□□□□□ -0.16
KRT20P35900 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
KRT20P35900 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
KRT20P35900 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC14.05□□□□□ -0.16
KRT20P35900 AC005225.4-201ENST00000557330 545 ntBASIC14.05□□□□□ -0.16
KRT20P35900 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC14.05□□□□□ -0.16
KRT20P35900 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC14.05□□□□□ -0.16
KRT20P35900 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC14.05□□□□□ -0.16
KRT20P35900 AC012645.4-201ENST00000610691 1061 ntBASIC14.05□□□□□ -0.16
KRT20P35900 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC14.05□□□□□ -0.16
KRT20P35900 AL603764.1-201ENST00000636452 321 ntBASIC14.05□□□□□ -0.16
KRT20P35900 PRSS30P-206ENST00000641773 873 ntBASIC14.05□□□□□ -0.16
KRT20P35900 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
KRT20P35900 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
KRT20P35900 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
KRT20P35900 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
KRT20P35900 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
KRT20P35900 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC14.05□□□□□ -0.16
KRT20P35900 LILRP1-201ENST00000444199 1370 ntBASIC14.05□□□□□ -0.16
KRT20P35900 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
KRT20P35900 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
KRT20P35900 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
KRT20P35900 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC14.05□□□□□ -0.16
KRT20P35900 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
KRT20P35900 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
KRT20P35900 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
KRT20P35900 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
KRT20P35900 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
KRT20P35900 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
KRT20P35900 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
KRT20P35900 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC14.05□□□□□ -0.16
KRT20P35900 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
KRT20P35900 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
KRT20P35900 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC14.04□□□□□ -0.16
KRT20P35900 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
KRT20P35900 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
KRT20P35900 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
KRT20P35900 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC14.04□□□□□ -0.16
KRT20P35900 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC14.04□□□□□ -0.16
KRT20P35900 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
KRT20P35900 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
KRT20P35900 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
KRT20P35900 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC14.04□□□□□ -0.16
KRT20P35900 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC14.04□□□□□ -0.16
KRT20P35900 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
KRT20P35900 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC14.04□□□□□ -0.16
KRT20P35900 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
KRT20P35900 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
KRT20P35900 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC14.04□□□□□ -0.16
KRT20P35900 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
KRT20P35900 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC14.04□□□□□ -0.16
KRT20P35900 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
KRT20P35900 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
KRT20P35900 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
KRT20P35900 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms