Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC15.5■□□□□ 0.07
RFC1P35251 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
RFC1P35251 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC15.5■□□□□ 0.07
RFC1P35251 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC15.5■□□□□ 0.07
RFC1P35251 AC112492.5-201ENST00000421897 457 ntBASIC15.5■□□□□ 0.07
RFC1P35251 CDC23-208ENST00000505120 455 ntTSL 3 BASIC15.5■□□□□ 0.07
RFC1P35251 AHRR-211ENST00000515206 462 ntTSL 5 BASIC15.5■□□□□ 0.07
RFC1P35251 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC15.5■□□□□ 0.07
RFC1P35251 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
RFC1P35251 C2orf69P2-201ENST00000562032 1123 ntBASIC15.5■□□□□ 0.07
RFC1P35251 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
RFC1P35251 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RFC1P35251 RHOXF1P1-202ENST00000635473 501 ntBASIC15.5■□□□□ 0.07
RFC1P35251 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RFC1P35251 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC15.5■□□□□ 0.07
RFC1P35251 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RFC1P35251 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RFC1P35251 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
RFC1P35251 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RFC1P35251 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC15.5■□□□□ 0.07
RFC1P35251 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RFC1P35251 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
RFC1P35251 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
RFC1P35251 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RFC1P35251 AC090505.1-201ENST00000430515 1834 ntBASIC15.5■□□□□ 0.07
RFC1P35251 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
RFC1P35251 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RFC1P35251 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RFC1P35251 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC15.49■□□□□ 0.07
RFC1P35251 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RFC1P35251 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RFC1P35251 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RFC1P35251 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RFC1P35251 RN7SL832P-201ENST00000607781 1756 ntBASIC15.49■□□□□ 0.07
RFC1P35251 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
RFC1P35251 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
RFC1P35251 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
RFC1P35251 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RFC1P35251 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RFC1P35251 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
RFC1P35251 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RFC1P35251 AHCYP2-201ENST00000430630 1300 ntBASIC15.49■□□□□ 0.07
RFC1P35251 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
RFC1P35251 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RFC1P35251 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RFC1P35251 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
RFC1P35251 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RFC1P35251 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RFC1P35251 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RFC1P35251 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
RFC1P35251 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RFC1P35251 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RFC1P35251 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
RFC1P35251 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RFC1P35251 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC15.49■□□□□ 0.07
RFC1P35251 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RFC1P35251 AC079776.1-201ENST00000401540 1152 ntBASIC15.49■□□□□ 0.07
RFC1P35251 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
RFC1P35251 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC15.49■□□□□ 0.07
RFC1P35251 RGS5-214ENST00000429865 754 ntTSL 3 BASIC15.49■□□□□ 0.07
RFC1P35251 U91328.1-201ENST00000437528 223 ntBASIC15.49■□□□□ 0.07
RFC1P35251 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RFC1P35251 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC15.49■□□□□ 0.07
RFC1P35251 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RFC1P35251 PFN2-215ENST00000497148 743 ntTSL 4 BASIC15.49■□□□□ 0.07
RFC1P35251 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC15.49■□□□□ 0.07
RFC1P35251 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC15.49■□□□□ 0.07
RFC1P35251 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC15.49■□□□□ 0.07
RFC1P35251 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
RFC1P35251 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC15.49■□□□□ 0.07
RFC1P35251 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
RFC1P35251 AL512343.1-201ENST00000605837 169 ntBASIC15.49■□□□□ 0.07
RFC1P35251 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
RFC1P35251 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.49■□□□□ 0.07
RFC1P35251 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RFC1P35251 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
RFC1P35251 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
RFC1P35251 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC15.49■□□□□ 0.07
RFC1P35251 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RFC1P35251 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC15.49■□□□□ 0.07
RFC1P35251 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
RFC1P35251 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
RFC1P35251 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RFC1P35251 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC15.49■□□□□ 0.07
RFC1P35251 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
RFC1P35251 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RFC1P35251 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
RFC1P35251 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC15.49■□□□□ 0.07
RFC1P35251 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC15.49■□□□□ 0.07
RFC1P35251 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RFC1P35251 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC15.48■□□□□ 0.07
RFC1P35251 OS9-204ENST00000389146 2091 ntTSL 2 BASIC15.48■□□□□ 0.07
RFC1P35251 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RFC1P35251 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
RFC1P35251 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC15.48■□□□□ 0.07
RFC1P35251 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
RFC1P35251 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC15.48■□□□□ 0.07
RFC1P35251 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC15.48■□□□□ 0.07
RFC1P35251 AC011498.7-201ENST00000624986 2027 ntBASIC15.48■□□□□ 0.07
RFC1P35251 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms